Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq21 120 2e-21 >seq21 Length=1304294 Score = 120 bits (132), Expect = 2e-21 Identities = 435/673 (65%), Gaps = 16/673 (2%) Strand=Plus/Plus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || || || || || || ||||| || ||||| | |||||||| | ||| || | || Sbjct 1165150 ACCAGTCGGTTGTCGAAGTCTTCGCCCCCCAAGTGCGTATTTCCCGCCGTCGCCTTGACC 1165209 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | |||| || ||||| | | || || | |||||| || || || |||| || Sbjct 1165210 TCAAAAATGCCCTCTTCGATCGTCAGCAGCGACACATCAAATGTGCCCCCGCCCAAGTCG 1165269 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || || || || || | | | | || || || |||||||||| || || Sbjct 1165270 AAGATCAGGACGTTGTGCTCGCCGCCCT---TCTTGTCCAGGCCATACGCAATCGCGGCG 1165326 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 || || || || || ||||| | | ||||| | |||||||| || ||||| || Sbjct 1165327 GCCGTGGGCTCGTTGATAATGCGAAGCACATTCAAGCCAGCAATCGCGCCGGCATCCTTG 1165386 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 || || || | || || ||||| || || || || |||||||| ||||||| || Sbjct 1165387 GTCGCCTGCCGCTGCGAGTCGTTGAAGTAGGCTGGCACAGTAATCACGGCATTCTGCACC 1165446 Query 518315 TCTTTACCAATATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAA 518372 || ||||| | ||||| ||| || ||||| || | | | ||| || |||| Sbjct 1165447 TCCACCCCAATGAA--CGCTTCCGCCACCTGCTTCATCTTGATCAGCACCATCGACGAAA 1165504 Query 518373 TTTGTTCTGG--GGAATATTGCTTGGATTCATT-TTGATATGATACTTCAAAATATGGTT 518429 | | ||| || |||| | |||| || |||| | | || ||| | || | Sbjct 1165505 TCTCTTCCGGCTGGAACGT--CTTGCTCTCGCCCTTGAATTCA-ACCACAATCTGCGGCT 1165561 Query 518430 TATTACCAA---CATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTT 518486 | | || | | || || |||||||||| || || |||| |||| | Sbjct 1165562 TGTCGCCCGGCCCGGCCACCACCTTGAATGGCCAGTGCTTGATGTCTGCCTGAATCATCG 1165621 Query 518487 GGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAA 518546 |||| ||||| | | || || || || || || ||||| | ||| || | || || | Sbjct 1165622 GGTCGTTAAACTTGCGCCCGATCAACCGCTTCGCGTCAAACACAGTGTTCGACGGGTTCA 1165681 Query 518547 TTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACAT 518606 | || |||| | ||||| || ||||||||||| | || || || ||||| | || | Sbjct 1165682 TCGCGACTTGGTTCTTGGCCGCGTCTCCAATCAGCCGCTCCGTGTCGGTAAAGGCCACGT 1165741 Query 518607 ATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCC 518666 | || || || ||||| || ||||| || |||||||| ||||| || | ||||||| Sbjct 1165742 ACGACGGCGTCGTGCGGTTGCCTTGGTCGTTCGCAATGATTTCGACGCGGTCGTTTTGCC 1165801 Query 518667 ATACACCTACACA 518679 | || ||||| || Sbjct 1165802 ACACGCCTACGCA 1165814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780798531195586