Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq11 136 9e-27 >seq11 Length=1510989 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| | || || || ||||| || ||||| ||| | || | |||||||| Sbjct 1070352 AACCAAGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCGCTCAACGTGCGGCCATCTTC 1070293 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || ||||| | || || ||||| || || |||||||| |||||||| Sbjct 1070292 GAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCTTG 1070233 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || ||||| |||||||| || || | ||||||| ||||| || || || | ||||| Sbjct 1070232 GATCTTTTGTTTGACGTTGTCGATCGAGTCCGAAGGCTCCACGTCCAGCGTGATGGTCTT 1070173 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||||||| || ||||| | ||||| Sbjct 1070172 CCCAGTCAAAGTCTTGACGAAAATCTGCAT 1070143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109474762472927