Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq76 87.8 1e-11 >seq76 Length=128956 Score = 87.8 bits (96), Expect = 1e-11 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 480627 TGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATC 480686 ||||| || ||||| || || ||||| ||||| |||||||| ||||||||||| |||||| Sbjct 44956 TGCTTGCCGGCAAAGATGAGTCGTTGCTGATCCGGAGGAATCCCTTCCTTGTCCTGAATC 45015 Query 480687 TTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCG 480746 || || |||||| ||||| | || | | || || ||||| || || ||| Sbjct 45016 TTCTGCTTGACATTGTCAATCGAGTCGGACGGCTCCACGTCGAGCGTAATGGTCTTGCCG 45075 Query 480747 GTGAGAGTCTTAACGAAAATTTG 480769 ||||| ||||| || || || || Sbjct 45076 GTGAGGGTCTTGACAAAGATCTG 45098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268158567576188