Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq27 100 6e-16 >seq27 Length=843962 Score = 100 bits (110), Expect = 6e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | || || || || ||||||| || ||||| || || || || || || Sbjct 479982 ACCACCACGCAGGCGGAGCACCAAGTGCAAGGTCGATTCCTTTTGGATGTTGTAGTCGCT 479923 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | | || ||||| | ||| || || |||||||| || | ||| ||||| || || Sbjct 479922 CAACGTGCGGCCATCTTCCAATTGCTTGCCGGCAAAGATGAGGCGTTGCTGATCAGGGGG 479863 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| || || |||||| || || || || |||| || ||||| || Sbjct 479862 GATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTGTCGATCGAGTCGGATGGTTCCAC 479803 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || || || || ||||||||||| || || || ||||| Sbjct 479802 ATCCAACGTGATGGTTTTACCCGTCAACGTCTTGACGAAGATTTGCAT 479755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981821149183059