Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq76 89.7 3e-13 >seq76 Length=128956 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| || || ||| || || || ||||| ||| | ||||| | || ||| Sbjct 44893 ACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTCAACGTGCGGCCATCCTCC 44952 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 || || || |||||||| || | || |||||||| | || | ||||| ||||| | Sbjct 44953 AACTGCTTGCCGGCAAAGATGAGTCGTTGCTGATCCGGAGGAATCCCTTCCTTGTCCTGA 45012 Query 33661 ATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || ||||| || | ||| |||| | |||| | |||||||| | ||| || || || Sbjct 45013 ATCTTCTGCTTGA-CATTGTCAATCGAGTCGGACGGCTCCACGTCGAGCGTAATGGTCTT 45071 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 || || | || || |||||||||||||| || Sbjct 45072 GCCGGTGAGGGTCTTGACAAAGATCTGCATGGT 45104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702073075520