Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq26 122 1e-22 >seq26 Length=915853 Score = 122 bits (134), Expect = 1e-22 Identities = 301/457 (66%), Gaps = 50/457 (11%) Strand=Plus/Plus Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979 || ||| | |||||||| ||| || || || || || | | || | |||||| || Sbjct 835465 AGAGGCGCGACGTGGTTCGAGTACACATGGGCATCGCCAATGACATGGATAAAGTCGCC- 835523 Query 146980 GGCTTA-AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTT 147038 ||||| |||||| |||| ||||| | |||| || || |||| |||||| || ||||| Sbjct 835524 GGCTTGGAGGCCGCTCACTTGGGCTAGCATGCGCGTCAGGAGCGCGTAGCTCGCAATGTT 835583 Query 147039 GAAGGGGACCCCCAGGCCCATGTCCCC----CG-----ACCTCTGG-------------T 147076 ||| ||||| || || ||||||||| | || || |||| | Sbjct 835584 GAATGGGACGCCGAGTCCCATGTCCGCGCTGCGCTGGTACATCTGCGCGAGTAGTCAGAT 835643 Query 147077 ACAG----------------------CTGGCACGAGAGCTCCCCGTCGGCCACGTAAAAC 147114 |||| ||||||||| ||||| |||||||| ||||||||| Sbjct 835644 ACAGTCGCAACATGGATGGTTGGCACCTGGCACGACAGCTCGCCGTCGGCGACGTAAAAC 835703 Query 147115 TGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCC 147174 ||||| || |||||||||||||||||||||||| | || ||| ||||| ||||| ||| Sbjct 835704 TGGCAGAGCATGTGGCACGGCGGCAGCGCCATGATGCCCAAGTCAGCGGGATTCCACGCC 835763 Query 147175 GAGACCACCA-GCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAG 147233 || | | | || || | |||| | | ||| |||| | || || | || Sbjct 835764 GACAAGATGATGCGGCGATCGTTCGGCG-TGTGCTTGATCTTGTAAATGACGTCCGCGAG 835822 Query 147234 CTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGT 147292 |||||| ||| || ||| ||| | || ||| || |||||| | || ||||| | Sbjct 835823 CTGGTCATGGCCTTGTCCCGTGTAATCCGT-GTGCATATCGACGTACGTCGCGCCAAAAT 835881 Query 147293 GCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 | | |||||| ||||| || || || |||| ||||| Sbjct 835882 GTCGCCACTGAAAGCCATAGACCGGGCCCAAATCGCC 835918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583484491778400