Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq11 86.0 4e-12 >seq11 Length=1510989 Score = 86.0 bits (94), Expect = 4e-12 Identities = 140/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATC--TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAA 34573 |||||||| ||||| || || | || ||| || | ||||| || || || || |||| Sbjct 1070333 TCCTTTTGGATGTTGTAGTCGCTCAACGTG--CGGCCATCTTCGAGCTGCTTGCCCGCAA 1070276 Query 34574 ATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG 34633 | || || ||||| ||||| ||||| | || ||||||||| ||||||||| ||| ||| Sbjct 1070275 AGATCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCTTGGATCTTTTG-TTTGACG 1070217 Query 34634 AT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTC 34692 | || | ||| |||||| |||| || || || || || || || || || Sbjct 1070216 TTGTCGATCGAGTCCGAAGGCTCCACGTCCAGCGTGATGGTCTTCCCAGTCAAAGTCTTG 1070157 Query 34693 ACAAAAATCTGCATGTT 34709 || ||||||||||| || Sbjct 1070156 ACGAAAATCTGCATATT 1070140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314727754996073