Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq26 82.4 6e-11 >seq26 Length=915853 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 27303 CTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAG 27362 ||| ||||| ||||| || ||| ||||||||||| || | ||||||||| || || Sbjct 835670 CTGGCACGACAGCTCGCCGTCGGCGACGTAAAACTGGCAGAGCATGTGGCACGGCGGCAG 835729 Query 27363 AGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCG 27410 ||||||| ||||||||| ||| ||||| || ||| ||||||||| Sbjct 835730 CGCCATGATGCCCAAGTCAGCGGGATTCCACGCCGACAAGATGATGCG 835777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369505033879511