Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq11 109 1e-18 >seq11 Length=1510989 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || || |||||||||||||| ||| || || | |||||||| || || || Sbjct 1070339 GTCGATTCCTTTTGGATGTTGTAGTCGCTCAACGTGCGGCCATCTTCGAGCTGCTTGCCC 1070280 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || ||||| | | ||||||||| | || ||| |||||||| ||||| || ||||||||| Sbjct 1070279 GCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCTTGGATCTTTTGTTTG 1070220 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || | || | ||| ||| ||| || || || || || || || || || | |||| Sbjct 1070219 ACGTTGTCGATCGAGTCCGAAGGCTCCACGTCCAGCGTGATGGTCTTCCCAGTCAAAGTC 1070160 Query 152088 TTCACGAAGACCTGCATTTT 152107 || ||||| | |||||| || Sbjct 1070159 TTGACGAAAATCTGCATATT 1070140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153813689218751