Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1679 86.0 5e-12 >seq1679 Length=19720504 Score = 86.0 bits (94), Expect = 5e-12 Identities = 220/324 (68%), Gaps = 12/324 (4%) Strand=Plus/Minus Query 18788 GGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGA 18847 ||| || || |||||| ||||||||||||||||| | || ||||| || || || || || Sbjct 7098707 GGGCGATCTCGGCCCCGTTTACGGCTTCCAGTGGCGCCACTTTGGCGCCGAGTACAA-GA 7098649 Query 18848 CTGTCAATCAA-ACTATTTA--CAGCAAGGAA-TCGATCAGCTGCAAACTG-TTATAGAT 18902 | || || || | | | || ||| | || ||||| | | | || | | Sbjct 7098648 C---CATGCACGACGAGTACGCCGGCCAGGGCGTAGACCAGCT-CGCGCAGCTTGTGCAC 7098593 Query 18903 ACAATTAAAACAAACCCAGAAAG-CCGACGAATGATTATATCGTCTTGGAATCCAAAGGA 18961 || || ||||| ||||| || | ||| || ||||| | ||| | ||||| || || Sbjct 7098592 ACCATCAAAACGAACCC-GACGGACCGCCGCATGATCCTCTCGGCCTGGAACCCGGCGGC 7098534 Query 18962 TATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGG 19021 ||| | | |||| || || || || |||| ||| ||||||||||| | || || Sbjct 7098533 GTTCCACCTCATGGCCCTGCCGCCCTGCCACATGTTCGCGCAGTTTTACGTGTCCAAGGG 7098474 Query 19022 TGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAA 19081 || | || |||||| | |||||| | ||||| || || ||||| || || || ||||| Sbjct 7098473 CGAGCTCTCGTGCCAAATGTACCAGCGGTCGGGCGACATCGGCCTGGGCGTGCCCTTCAA 7098414 Query 19082 CATTGCTGGATATGCACTTCTTAC 19105 |||||| || || ||||| || Sbjct 7098413 CATTGCCTCGTACGCGCTTCTCAC 7098390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399495007040115