Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1679 104 5e-17 >seq1679 Length=19720504 Score = 104 bits (114), Expect = 5e-17 Identities = 335/515 (65%), Gaps = 4/515 (1%) Strand=Plus/Minus Query 35207 CTTCGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTG 35266 || || |||||||| || || | || || |||||| | || ||| | || || | Sbjct 7098895 CTCCGCGACGACACCATCCCGCTGCTGACGACCAAGCGCGTCTTTTGGCGCGGCGTCGCC 7098836 Query 35267 GAAGAACT-CTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAA 35325 || ||||| ||| ||||||||| |||| | || |||||| || | ||| | Sbjct 7098835 GAGGAACTGCTC-TGGTTCATCTCGGGCGACACCAGCGCCAAGTCGCTGCAGGAAAAGGA 7098777 Query 35326 GATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGA 35385 || ||||| ||| ||| || ||||| || | | | |||| | || | || Sbjct 7098776 CATTCACATTTGGGACGGCAACGGGTCCCGCGCGTACCTTGACAAGATCGGCCTCACGGA 7098717 Query 35386 TAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGA 35445 | | | ||||| ||| | || ||||| ||||| ||||| ||||| || ||||| || || Sbjct 7098716 TCGCGAGGAGGGCGATCTCGGCCCCGTTTACGGCTTCCAGTGGCGCCACTTTGGCGCCGA 7098657 Query 35446 ATATGATACC-TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATAC 35504 || | ||| || | | || || | || |||| | || || | || | | Sbjct 7098656 GTACAAGACCATGCACGAC-GAGTACGCCGGCCAGGGCGTAGACCAGCTCGCGCAGCTTG 7098598 Query 35505 TAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTA 35564 | | ||| | | | || || || | | ||||| | |||| ||||| || Sbjct 7098597 TGCACACCATCAAAACGAACCCGACGGACCGCCGCATGATCCTCTCGGCCTGGAACCCGG 7098538 Query 35565 TGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTA 35624 || | ||||| ||||| || || || ||||||||| || || ||||| ||| | | Sbjct 7098537 CGGCGTTCCACCTCATGGCCCTGCCGCCCTGCCACATGTTCGCGCAGTTTTACGTGTCCA 7098478 Query 35625 ATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCT 35684 | || || | |||||||| |||| ||||| || || |||| |||||||||||| Sbjct 7098477 AGGGCGAGCTCTCGTGCCAAATGTACCAGCGGTCGGGCGACATCGGCCTGGGCGTGCCCT 7098418 Query 35685 TCAATATTGCATCATACTCTCTTCTGACTCATCTG 35719 |||| ||||| || ||| | ||||| || |||||| Sbjct 7098417 TCAACATTGCCTCGTACGCGCTTCTCACGCATCTG 7098383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989560581803885