Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq323 122 7e-23 >seq323 Length=717221 Score = 122 bits (134), Expect = 7e-23 Identities = 209/299 (70%), Gaps = 12/299 (4%) Strand=Plus/Minus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGC 5653 |||||||| || | |||||| ||| || |||| | | || |||| |||||| ||| Sbjct 624549 AGCTGCGCGATCCTGTCGCCGACCTTGACGTCGAGGGCCTCGTCGCCGTGGTTGAAGAGC 624490 Query 5654 ACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAG 5713 || ||||| ||||| |||||||||||| ||| || ||||||||||| ||||||||| Sbjct 624489 ACGACGCCGACGTTTCCGCGGTAGTCGCGGTCGATGACGCCCGCGCCGACGTCGATGTGC 624430 Query 5714 TGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCCATCGGGAAGCTGT 5773 | ||| ||| || || || || || ||||||||||||||| || |||| | ||| Sbjct 624429 TTCTTCCACGCGAGCCCCGACCGCGGCGCCACGCGGCCGTAGGTGCCCGCGGGGACCTGG 624370 Query 5774 ATCTGCAGGTC---CGTGAACA-CCACTCGCCGACCGCCCGCAGGGACGATGCAGTCGCA 5829 | || ||| | ||| | || || |||| | ||| |||| || | | || Sbjct 624369 ACGGCCACGTCGGTCTTGACGAGCCCCTTGCCGGCGGCC----GGGATGA--CCGCATCA 624316 Query 5830 AGCGCTGC--AGAGGTCGTACCCGGCCGCCCGCGGGGACCCCCTGGTGGGGAGCGTGGC 5886 |||| || | |||||| ||||||||| || |||||| | ||| || | ||| || Sbjct 624315 TGCGCCGCGTACAGGTCGAGGCCGGCCGCCTCCGCGGACCCGCGGGTCGGCACCGTCGC 624257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430044719341064