Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq323 114 9e-21 >seq323 Length=717221 Score = 114 bits (126), Expect = 9e-21 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 75018 GGCAGGGCCCTGGTAAAGACAGACCTGGCCGTTAAGATGCCCCCGGGCCTCTACGGCAGG 75077 |||| || || || ||||| ||| ||||||| || | ||| ||||| ||||||| | Sbjct 624338 GGCAAGGGGCTCGTCAAGACCGACGTGGCCGTCCAGGTCCCCGCGGGCACCTACGGCCGC 624397 Query 75078 GTGGCTCCCAGGTCCGGCCTGGCCCTGAAAAAATTTATAGACGTCGGTGCCGGGGTGGTG 75137 ||||| || |||| || || || ||| || || |||||||| || || || | Sbjct 624398 GTGGCGCCGCGGTCGGGGCTCGCGTGGAAGAAGCACATCGACGTCGGCGCGGGCGTCATC 624457 Query 75138 GACCCCGACTACAGGGGCAACCTCGGCGTCATACTGTTTAACTTTGGGTGCGACCCCTTT 75197 |||| ||||||| | || ||| |||||||| | || || ||| || ||| || | Sbjct 624458 GACCGCGACTACCGCGGAAACGTCGGCGTCGTGCTCTTCAACCACGGCGACGAGGCCCTC 624517 Query 75198 CGGGTCAAGAGGGGCGACAGGATAGCCCAGCTCGTGCTCGAGA 75240 |||||| ||||||||||| || |||||||||||||||| Sbjct 624518 GACGTCAAGGTCGGCGACAGGATCGCGCAGCTCGTGCTCGAGA 624560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338757174298488