Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015-
12-09] 1,847 sequences; 43,429,441 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1679 286 9e-72
seq1721 87.8 5e-12
>seq1679
Length=19720504
Score = 286 bits (316), Expect = 9e-72
Identities = 1050/1631 (64%), Gaps = 30/1631 (2%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||||||||||||||| || | | ||| || || || | || || |||||
Sbjct 15184976 TTCACGCACGCCACGCCGACCCTCTTCAACGCCGGCACCCCCCGCCCGCAAATGTCGAGC 15185035
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | ||||||||||| || |||||||| ||||| | || || |||
Sbjct 15185036 TGCTTCCTCGTGCACATGAAGGACGACTCGATCGAGGGCATCTTCCAGACGCTCGAGACC 15185095
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA 363726
|| || | || |||||| | || ||||| || || || |||||||| | || ||
Sbjct 15185096 TGCGCGCGCATCTCCAAGTACGCCGGCGGCATCGGCGTCAACATCCACAACATCCGCGCC 15185155
Query 363727 CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786
| ||| ||| | |||||| || | ||||| || | || || ||||||||
Sbjct 15185156 TCGGGCAGCTACGTCGCCGGCACCAACGGCCAGTCGAACGGCATTGTGCCTATGCTTCGC 15185215
Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846
|| || || | || || | ||||| |||||||| || || |||||||| || | ||
Sbjct 15185216 GTCTTCAACGACACCGCCCGCTACGTGGACCAGGGCGGCGGCAAGCGCAAGGGCTCCTTC 15185275
Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906
|| ||||| ||||||||| || ||||| | || || |||||||||| || |||
Sbjct 15185276 GCCATGTACCTCGAGCCTTGGCACGCCGACGTCGAGGACTTCATTGAGCTCCGCAAGAAC 15185335
Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966
|| || ||||| | || || || || || ||||| || || ||||| | |||| |
Sbjct 15185336 CACGGCAAGGAGGAGGTCCGCGCCCGCGACCTCTTCTACGCCCTCTGGGTCCCCGACCTT 15185395
Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCA 364026
|||||| |||| || ||||| | | ||| | ||||| ||||| |||| | |||
Sbjct 15185396 TTTATGCAGCGTGTCGAGGCCAACAGCACCTGGACCCTCTTCTGCCCGAACGA--GGCCA 15185453
Query 364027 --GGTCTTTCCGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATC 364082
|| || || ||||| | || ||||| | | | |||| ||||| || ||
Sbjct 15185454 AGGGCCTCTCGGATGTCTACGGCGACGAGTTCAAGGAGCTC--TACGAGCGCTACGAGAA 15185511
Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142
|||||| | || ||||| || | ||| ||| | || |||| ||| || |
Sbjct 15185512 GGAGGGCCGCGGCCGCAAGACCATGCGCGCCCAGGACCTCTGGTACCAGATCCTGAGCTG 15185571
Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202
||||| ||||| || || | ||| | | ||| || | |||||||||||||| ||
Sbjct 15185572 CCAGATCGAGACCGGCGTGCCGTTCATGCTCTTCAAGGACGCCTGCAACCGCAAGTCGAA 15185631
Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACAC 364262
|||| || |||| || | || || ||||| || |||||||| || || ||| |
Sbjct 15185632 CCAGAAGAACCTCGGCATCATCAAGTCCTCGAACCTGTGCACCGAGATCATCGAGTACTC 15185691
Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA- 364321
|| || |||||| ||||| || ||||| || || ||| || | ||| || |
Sbjct 15185692 GGCCCCTGACGAGGTCGCCGTCTGCAACCTCGCCTCCATCAACCTGCGCAAGTTCGTCAA 15185751
Query 364322 -----AAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTG 364376
| || || || | ||| |||| || || || || ||| | | ||
Sbjct 15185752 CATTGAGGAGGGCACCTACGACTTCCAGGCCCTCTACGATGTCACCAAGGTCGTCACCAA 15185811
Query 364377 CAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAA 364436
|| ||| || || |||||| || | || || | || |||||||| ||
Sbjct 15185812 GAACCTCAACCGCGTCATCGACGGCAACTTCTACCCCGTCGAGGAGGCCGAGCGCAGCAA 15185871
Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496
| ||| || ||||| || || |||| || ||||||||||| | | | ||| |||
Sbjct 15185872 CACGCGCCACCGCCCCATCGGCATTGGCGTTCAGGGCCTCGCCAATGCGCTCATGGAGCT 15185931
Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556
| | ||||| || || || || || || || ||||| || || ||
Sbjct 15185932 GCGCTTCCCCTTTGAGAGCCCGGAGGCCCGCAAGCTCAACCGCGACATCTTCGAGACCAT 15185991
Query 364557 GTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTAC 364616
|| |||| ||| || || ||||| || |||| | |||| |||| ||
Sbjct 15185992 CTACTTTGGCGCCTGCACCGCCTCGTGCGAGCTGGCGCAGGAGGAGGGCCCGTACCAGAC 15186051
Query 364617 TTATGAGGGGTCCCCTCTTTCGC-AGGGAAAATTCCAGTTTGATCTATGGAATGTCACGC 364675
| | ||||| || | | || |||| || |||||||| || || ||||| | | ||
Sbjct 15186052 CTTTTCCGGGTCGCC-CATGAGCGAGGGCAAGTTCCAGTTCGACCTCTGGAACGAGAAGC 15186110
Query 364676 C--ATCTG----TCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTA 364729
| | | | || | ||| ||||||| ||||| ||| ||| | | |||| |||
Sbjct 15186111 CCAACCCGGAGCTCGGCTGGGACTGGGAGACGCTGCGTCAGCGCGTCATGCAGCACGGTG 15186170
Query 364730 CTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAA 364789
|| ||||| || | ||||||||||||||||| || || | ||||| ||||| |
Sbjct 15186171 TGCGTAACTCGCTGCTGGTCGCGCCCATGCCCACGGCCTCGACCTCGCAGATTCTCGGCA 15186230
Query 364790 ACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAG 364849
|| |||| ||| || || || || ||||| | || || ||||| || || | || |
Sbjct 15186231 ACTGCGAGGCCTTTGAGCCCTTCACCAGCAACATGTACTCGCGCCGCGTCCTCGCTGGCG 15186290
Query 364850 AATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTG 364909
| || |||| || || | |||| ||||||| || | ||||| || |||
Sbjct 15186291 AGTTCACGGTCGTCAACACACACCTGCTCAAGGACCTCATCTCGCGCGGTCTCTGGACCC 15186350
Query 364910 ACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTC 364969
||| ||| | ||||| |||| || || ||||||||| || | | |
Sbjct 15186351 CGGCCATCCGCAACCAGATCATGGCCGACCGCGGCTCGGTGCAGAACGTTGGCGCCATCC 15186410
Query 364970 CAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGC-GAACT--CTCA 365026
| || || || ||| | | ||||| ||||| ||||| || || || | || ||||
Sbjct 15186411 CCGACGACCTCAAGGCGCTCTACAAGACCGTCTGGGAGAT---CAAGCAGCGCTGCCTCA 15186467
Query 365027 TTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086
| ||| | || ||||||||||| || || ||| ||| |||||| | ||| | | ||
Sbjct 15186468 TCGATCTCGCCGCCGATCGCGGCGCCTTCATCGACCAGTCGCAGTCGCTCAACATCTACA 15186527
Query 365087 TGACTCA-GCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGT 365145
|| | | |||| | || | |||||| || || || || ||| |||||| ||||
Sbjct 15186528 TGGCCGACGCCACCGTCAG-CAAGCTCACCTCGTGCCACTTTTACTCGTGGAAGCGCGGT 15186586
Query 365146 CTTAAGACAGG 365156
|| ||||| ||
Sbjct 15186587 CTCAAGACCGG 15186597
Score = 84.2 bits (92), Expect = 6e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 111482 CGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTA 111541
||| || || |||||||| || |||||||| || || |||||||||||||| || || ||
Sbjct 7098713 CGAGGAGGGCGATCTCGGCCCCGTTTACGGCTTCCAGTGGCGCCACTTTGGCGCCGAGTA 7098654
Query 111542 CAAAACCATGCACGAC 111557
||| ||||||||||||
Sbjct 7098653 CAAGACCATGCACGAC 7098638
>seq1721
Length=237271
Score = 87.8 bits (96), Expect = 5e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 22504 tttGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaa 22563
||||| | || || ||||| ||||| || || | ||||| || ||||| ||||| ||
Sbjct 46445 TTTGCGGCCGTCGAGGGCATCTTCTTCTCGGGCTCCTTTTGCGCCATCTTCTGGCTCAAG 46504
Query 22564 aaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGT 22623
|| || | | ||||||||||| || || || |||||| | || ||||| || |||||
Sbjct 46505 AAGCGCGGCCTCATGCCGGGTCTCACCTTCTCCAATGAGATGATCAGCCGCGACGAGGGC 46564
Query 22624 CTTCATACCGATTTTGCGTGTATGCT 22649
| || ||||| ||||| || ||||
Sbjct 46565 ATGCACACCGACTTTGCTTGCCTGCT 46590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303322756544354
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |