Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1811 104 2e-17 >seq1811 Length=963003 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || | || ||| |||| || ||| ||| | Sbjct 706205 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACCCTCGACGTTGAGCCCAGC 706146 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || || ||||| ||||| || ||||| || || |||||| Sbjct 706145 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAA 706086 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||||||||| ||||| || | | | | ||||||| || ||| Sbjct 706085 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCAGCGACTACAAC 706026 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 706025 ATCCAGAAGGAGTCCAC 706009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429926322006285