Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1679 127 2e-24 >seq1679 Length=19720504 Score = 127 bits (140), Expect = 2e-24 Identities = 424/655 (65%), Gaps = 5/655 (1%) Strand=Plus/Plus Query 20171 AGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCG 20230 || ||||| | || ||||||| |||||| || || | ||| || ||||||||| Sbjct 7098297 AGGGGCTCGACGTGGTTTTTGTAAATGTGGCAGTCGCCGATGACGTGGATGAACTCCCCG 7098356 Query 20231 GGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTA 20290 | | || || || | || |||| || || | || | || ||||||||| Sbjct 7098357 GCGCGCAGGCCGGTGCACTTTGCGAGCAGATGCGTGAGAAGCGCGTACGAGGCAATGTTG 7098416 Query 20291 AAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCG 20350 || || || |||| || ||||| ||||||| ||| |||| || || || ||||| || Sbjct 7098417 AAGGGCACGCCCAGGCCGATGTCGCCCGACCGCTGGTACATTTGGCACGAGAGCTCGCCC 7098476 Query 20351 TCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCC 20410 | | || ||||| || |||| ||| |||||||| || ||||| | || || Sbjct 7098477 TTGGACACGTAAAACTGCGCGAACATGTGGCAGGGCGGCAGGGCCATGAGGTGGAACGCC 7098536 Query 20411 GCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCC 20470 ||||||||||| || | | || || | | || ||| || |||| || | | Sbjct 7098537 GCCGGGTTCCAGGCCGAGAGGATCATGCGGCGGTCCGTCGGGTTCGTTTTGATGGTGTGC 7098596 Query 20471 ACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTAC 20530 |||| | || | ||||| | |||||||| | || || | | | | | |||| Sbjct 7098597 ACAAGCTGCGCGAGCTGGTCTACGCCCTGGCCGGCGTACTCGTCGTGCATGGTCTTGTAC 7098656 Query 20531 GCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTG 20590 | || |||||||| | ||||||||| |||||||| || || | ||| |||||| | Sbjct 7098657 TCGGCGCCAAAGTGGCGCCACTGGAAGCCGTAAACGGGGCCGAGATCGCCCTCCTCGCGA 7098716 Query 20591 TGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA-C 20649 | || |||||| | | | ||| || | | ||| || || |||||| || | | Sbjct 7098717 TCCGTGAGGCCGATCTTGTCAAGGTACGCGCGGGACCCGTTGCCGTCCCAAATGTGAATG 7098776 Query 20650 TCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTG 20709 |||| ||| || ||| | ||| | || ||| | ||||| ||||| || | Sbjct 7098777 TCCTTTTCCTG-CAGCGACTTGGCGCTGGTGTCGCCCGAGATGAACCAGAGCAGTTCCTC 7098835 Query 20710 CACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTA-AGGGAAAGTG--GTCCCGCAG 20766 | ||||| |||||||| || ||||| || || || | |||| ||| ||| || || Sbjct 7098836 GGCGACGCCGCGCCAAAAGACGCGCTTGGTCGTCAGCAGCGGGATGGTGTCGTCGCGGAG 7098895 Query 20767 ACTATACCTGGCCTGCATGCCAAATAGAGAGAGGGTGCCTATGCCGGTGCGGTCG 20821 ||||| | | | ||||||| ||||| || || | ||||| |||||| Sbjct 7098896 GCTATAGCGCATCGTCGTGCCAAAGGTGGAGAGCGTCCCGGTCCCGGTCCGGTCG 7098950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441362609805480