Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1679 84.2 2e-11 >seq1679 Length=19720504 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 ||| ||||||| || || || ||||||||||||||| | | ||| | ||| | | Sbjct 15184868 AAGATCGCCGAGCGCCCGCAGCACATGCTCATGCGCGTCTCCGTCGGCATCCACAAGCAC 15184927 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 |||||||| ||| | ||| || ||||| ||||||| || || || ||||||||||| Sbjct 15184928 GACATCGATCGCGCCATCGAGACCTACGACATGATGTCGCAGAAGTTCTTCACGCACGCC 15184987 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCAC 123043 | || || | ||| ||||||||| Sbjct 15184988 ACGCCGACCCTCTTCAACGCCGGCAC 15185013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451992764376120