Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1679 82.4 6e-11 >seq1679 Length=19720504 Score = 82.4 bits (90), Expect = 6e-11 Identities = 115/157 (73%), Gaps = 16/157 (10%) Strand=Plus/Minus Query 34453 GCGCCCAGCTCGCACCCGAAGTACTTTGTC----GGGTAAATGGCCGGACGTCCAAGCGC 34508 |||||||||||||| || ||| |||| ||| ||| |||||| | || || Sbjct 8821107 GCGCCCAGCTCGCAGCCAAAGAACTTGGTCACCTGGGCCGTGGGCCGGTGG----AGGGC 8821052 Query 34509 CTTGGCGATTTCGG-GCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGA 34567 || ||||| |||| ||| |||||||||||| |||||||| |||||||| ||||||| Sbjct 8821051 CTGCGCGATGTCGGCGCA-GTTGACGATGACCGTCTTGATACCGTTGCCGCGGCCTTCGA 8820993 Query 34568 CCTTGGCGCAGATGCGC---GGCATTTTGTAGCGGTA 34601 ||| || |||| || ||||| ||||| ||||| Sbjct 8820992 TCTT---GCCGATGAGCTTGGGCATCTTGTACCGGTA 8820959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412832306806571