Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq1537 84.2 2e-11 >seq1537 Length=224974 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/168 (71%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 146408 GAGCAGACCGATTACAAGCACGGGGAGCAAAACTTGTGCGAGACCATCATTAAGTTCGCG 146467 |||||||||| ||| | ||||| ||||| || | ||||||| || | ||| Sbjct 202906 GAGCAGACCGCCTACCACCACGGTGAGCAGTCTCTGACCTCCACCATCACCAACATGGCG 202847 Query 146468 CAGGATTTTGTGGGCAGCAATAATATCCCCCTTCTCTACCAGATGGG-CAATTCGGAACA 146526 ||||| |||||||||||||| ||| |||| || || |||| ||| || ||||| || Sbjct 202846 CAGGACTTTGTGGGCAGCAACAATCTCCCGCTCCTGTACCCCTCGGGCCAGTTCGGCACG 202787 Query 146527 AGGTTGGAAGGAGGGAAGGACGCTGCAAGTCCCAGATATATTTTCACC 146574 | || | || || ||||||||||| || || | || || |||||| Sbjct 202786 CGACTGCAGGGTGGCAAGGACGCTGCGAGCCCGCGTTACATCTTCACC 202739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521533558815960