Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_024771.1 Length=151601 Score E Sequences producing significant alignments: (Bits) Value seq1679 96.9 3e-15 >seq1679 Length=19720504 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/216 (71%), Gaps = 5/216 (2%) Strand=Plus/Plus Query 107328 CGCACCGTGAGCGTCGTGTTGATGAGGAGCACCCCCTGGAGGGCCCACTTTTCCAGGTAG 107387 |||||||||||| ||||||| |||||||| ||||| |||||||||| ||| | Sbjct 11776430 CGCACCGTGAGCACGGTGTTGAGCAGGAGCACGCCCTGCTGGGCCCACTTGGTGAGGGAC 11776489 Query 107388 CCGTGGGCGGGGA-GGCGAAATGCCGGGTAGGTCTTTTGCACCGCCGCGTAGATGTTGCG 107446 ||| | ||| ||||| | | | | | | || | || |||||||||||| Sbjct 11776490 CCGGTGTTGGGCTTGGCGATCTTCACGTCCG--CCATAGC--CTCCTTGTAGATGTTGCG 11776545 Query 107447 CAGGCTTGGGGGAACTGGCACCCCCTTTCGCACGCTGAAAGCCAGCCCGTGCGCCTGGCC 107506 || || || | | ||| |||| | ||||| ||| || ||||||||||||||||| Sbjct 11776546 GAGCGAGGGCGGGATGGCCACGCCCTCTTGCACGGAGAACGCGAGCCCGTGCGCCTGGCC 11776605 Query 107507 GGGGCCGTGGTAGGGGTCCTGGCCGACGATCACAAC 107542 || |||||||| |||||||| |||| ||| || || Sbjct 11776606 CGGCCCGTGGTACGGGTCCTGACCGAGGATGACTAC 11776641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484984002673320