Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq1679 82.4 8e-11 >seq1679 Length=19720504 Score = 82.4 bits (90), Expect = 8e-11 Identities = 195/289 (67%), Gaps = 13/289 (4%) Strand=Plus/Minus Query 142561 ATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATG 142620 ||| || | || |||||||| || | || || |||||| || || || || |||||| Sbjct 7098559 ATCCTCTCGGCCTGGAACCCGGCGGCGTTCCACCTCATGGCCCTGCCGCCCTGCCACATG 7098500 Query 142621 ATGTTCCAATTCCACGTCGACTCGAAGAAGCGT-CTGTCATGCCAGCTGTATCAGCGTTC 142679 | || || |||| || ||| ||| || || ||||| |||| ||||| || Sbjct 7098499 TTCGCGCAGTTTTACGTG---TCCAAGG-GCGAGCTCTCGTGCCAAATGTACCAGCGGTC 7098444 Query 142680 GGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACAGCT 142739 || ||| ||| ||||| || ||||||||||| ||||||||||||||||| || | Sbjct 7098443 GGGCGACATCGGCCTGGGCGTGCCCTTCAACATTGCCTCGTACGCGCTTCTCACGCATC- 7098385 Query 142740 CATTGCTCGCGAA-TG---CGGTCTGGAACTCGGAGACTTCGTCCACACCTTCGGCAATT 142795 ||||||| || || ||| ||| ||| || ||| ||||| | ||||| | | Sbjct 7098384 ---TGCTCGCAAAGTGCACCGGCCTGCGCGCCGGGGAGTTCATCCACGTCATCGGCGACT 7098328 Query 142796 CGCACATCTACGATACACACGAAGAAGCTGTGAAAGAACAACTCAGCCG 142844 ||||| ||| | | |||| || | | || ||||| || | ||| Sbjct 7098327 GCCACATTTACAAAAACCACGTCGAGCCCCTCAAGGAACAGCTTAACCG 7098279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500487644724720