Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq1679 129 8e-25 >seq1679 Length=19720504 Score = 129 bits (142), Expect = 8e-25 Identities = 268/391 (69%), Gaps = 16/391 (4%) Strand=Plus/Plus Query 184419 GTGAAGACGGCGTGCTTGGACTTGTCCACCAGACCGGCCTTCTCCTTGGCGTGGTTGCCC 184478 |||| |||| |||||||||| ||| || | |||||||||||| |||||| |||||| Sbjct 11776265 GTGATGACGAGGTGCTTGGACCGGTCGACGAAGGCGGCCTTCTCCTGGGCGTGCTTGCCC 11776324 Query 184479 CAGAGCAGGAAGACCAGGCCCTCGGTCTTCTTGGAGAGTTG----CGTG-ATGACCCTGT 184533 ||||||| |||||| |||||| | ||| |||| | ||| || | |||||| || Sbjct 11776325 CAGAGCATGAAGACGAGGCCC---GACTT-TTGGTCA-TTGAGCACGCGAATGACCTGGT 11776379 Query 184534 CGCTGAGCACCCTCCAGCCCAGGTTGGAGTGCGACCCGGGCACGCCTCTGATCACGGTGA 184593 || ||| | |||||| | || |||||| | | || ||| ||| |||| Sbjct 11776380 CGGTGAACTTTTCCCAGCCGAATTTCTTGTGCGAGTGCGCCTCGGACCTGCGCACCGTGA 11776439 Query 184594 AGGCCGTGTTCAGCAGGAGCACCCCCTGGCGCGCCCAGCTGTCGAGGTGGCCGTGGTTGG 184653 | ||||| ||||||||||| ||||| | ||||| || |||| ||| ||||| Sbjct 11776440 GCACGGTGTTGAGCAGGAGCACGCCCTGCTGGGCCCACTTGGTGAGGGACCCGGTGTTGG 11776499 Query 184654 GCGTCCGGAACCCCTCGATGGAGCGTTGCAGCTCCCTGTAGATGTTGCGCAGCGACGGCG 184713 || | || | | || | | | || |||| ||||||||||||| ||||| |||| Sbjct 11776500 GCTTGGCGATCTTCACG-TCCGCCATAGC--CTCCTTGTAGATGTTGCGGAGCGAGGGCG 11776556 Query 184714 CCACGGCC---CCGTCACCCGTGGAGAAGGCCAGGCCGTCGGCGCGACGGGGTTGCGGGT 184770 | |||| || || | |||||| || || |||| || | | || ||| Sbjct 11776557 GGATGGCCACGCCCTCTTGCACGGAGAACGCGAGCCCGTGCGCCTGGCCCGGCCCGTGGT 11776616 Query 184771 ACGGGTCCTGACCCACGATGACGACCTTGAC 184801 ||||||||||||| | |||||| |||||||| Sbjct 11776617 ACGGGTCCTGACCGAGGATGACTACCTTGAC 11776647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658723991358720