Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq805 87.8 7e-13 >seq805 Length=34318 Score = 87.8 bits (96), Expect = 7e-13 Identities = 189/275 (69%), Gaps = 6/275 (2%) Strand=Plus/Minus Query 31005 CCATGCACATGTG-TCGCGCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCG 31063 ||||||||||||| ||| |||| |||| || ||||||||| || || ||| ||| Sbjct 17422 CCATGCACATGTGCTCG-GCCTCGATGATGACGGCGACGCCCTGGGGGTCGAGGATCTCC 17364 Query 31064 AACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATAC 31123 | | || || |||||||| |||||| || ||||| || || ||||| || || || Sbjct 17363 ATGATGGCCTCGGCGATCTGCGTTGTGAGGCGCTCCTGGACCTGGAGGCGACGCGCGAAC 17304 Query 31124 ATGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTG 31183 || || | ||| | |||||| ||||| | ||| || | || || ||||| | Sbjct 17303 ATCTCGCTGACGCGCGCGAGCTTGGAAAGGCCGAGGATGCGGCGCTTGGGGATGTAACCA 17244 Query 31184 ATCGTGAC-CGTGCCGAAGATCGGCGCGAGGTGATGCTCGCA-ATGTGAGTAGATGGGGA 31241 || ||| | | |||| || ||| ||||||| |||||||| ||| || ||| | || Sbjct 17243 AT-GTGGCACTTGCCCTTGAAGGGCACGAGGTGGTGCTCGCACATG-GAAAAGAGGTCGA 17186 Query 31242 TGTCGCGCACCGTCACCATCTGGTCATGCTTCTCC 31276 |||| || | ||||||| || || | |||| Sbjct 17185 TGTCTTTGACGATGACCATCTCGTGGTGGTCCTCC 17151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187285492153792