Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq95 86.0 1e-11 seq14 86.0 1e-11 >seq95 Length=21576 Score = 86.0 bits (94), Expect = 1e-11 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||| Sbjct 793 CTAGCTCAGTCGGTAGAGCGCACGACTCTTAATCGTGTGGTCGTGGGTTCGAGCCCCACG 852 Score = 86.0 bits (94), Expect = 1e-11 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||| Sbjct 6323 CTAGCTCAGTCGGTAGAGCGCACGACTCTTAATCGTGTGGTCGTGGGTTCGAGCCCCACG 6264 >seq14 Length=1107847 Score = 86.0 bits (94), Expect = 1e-11 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||| Sbjct 522518 CTAGCTCAGTCGGTAGAGCGCACGACTCTTAATCGTGTGGTCGTGGGTTCGAGCCCCACG 522577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057807939256550