Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq16 109 6e-19 >seq16 Length=966663 Score = 109 bits (120), Expect = 6e-19 Identities = 303/456 (66%), Gaps = 14/456 (3%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || |||||||||||||| || | || ||||| | | ||| || |||||||| || | Sbjct 489005 AGGCACGCGAAGTCGCAGTGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGAG 488946 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | || ||||| || || ||||| | |||||| | ||| ||| || || || || || Sbjct 488945 AGGCCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGACCGC-GCAGAACGAGCCGGAGAA 488887 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCA---TCTTT 16374 ||| || ||||| || | || || ||||| | || |||||| | | || || Sbjct 488886 GAAGATGCCCTCGACGGCCGCGAAGGCGATGATGCGCTCCGCGAAGGACGCGCGGTCCGG 488827 Query 16375 ATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTAT 16434 | || | ||| | | |||| | ||| |||| | | || ||| || || || Sbjct 488826 GT--CGCA-CCAGCGCAGCGCCCACTGGGCCTTTTTGGTCACGCAGGGCATGGTGTCGAT 488770 Query 16435 GGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494 |||| | | | | | ||||||| ||| || ||||| || || || | || Sbjct 488769 GGCCGTGAGGCACTCGTGCTTTTCCTTGGCGTCGCGGATGTACGTGTCGATGAGCAGGCT 488710 Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554 ||| | || ||||| |||||||| ||||| ||||| || || |||||||| || ||||| Sbjct 488709 GTAGACCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGCGCCTC 488650 Query 16555 CGCTATTTGTACTTCCA-CGTAAAATCGTTCCG--CCAGGTTCTCATTCACGATACCGTC 16611 || || || ||| || || |||| | |||||||||| || ||||| ||||| Sbjct 488649 GGCCCACTGCACCTCCGTCGCGAA---GTTCTGGGCCAGGTTCTCGTTGACGATGCCGTC 488593 Query 16612 ACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAA 16647 || || || ||||| | | |||||| ||||| Sbjct 488592 GGACGCCGCGAAGAACGCGAGCACGTGCTTGATGAA 488557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511406824674200