Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq30 441 8e-119 >seq30 Length=470201 Score = 441 bits (488), Expect = 8e-119 Identities = 630/871 (72%), Gaps = 31/871 (4%) Strand=Plus/Minus Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596 ||||| ||||||| |||| ||| | || ||| | ||||||||| | | ||||| Sbjct 314640 TAGACGGCCATCTTCATGTCGATCTTGGGGTAGGGCTTGTAGCCCTCGACGGTGAAGTCG 314581 Query 145597 TCCGCCCTGAAGTCATCTATGTCC-TCCAC-CCGCCTCAGGATCCTGAGCCTGGGAAAGG 145654 | | |||||| || ||| || || | ||| | ||| ||||| | || |||| Sbjct 314580 GCGAACTCGAAGTCGTCGATGCCCGTCTTCGCCGGGTT--GATTGTGAGCGTCGGGAAGG 314523 Query 145655 GCCGGGGGCTC---CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGT 145711 ||||||| ||| |||| ||||||| ||| || | || |||||||| |||||||| Sbjct 314522 GCCGGGG-CTCGCGCTGG--AGCTGGACCTTGAGCGCGTCGACGTGGTTCGAGTAGACGT 314466 Query 145712 GCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCA 145771 ||||||| || | |||||||| |||||| || |||| ||||||||| || ||||||| Sbjct 314465 GCGCGTCGCCGATGACGTGGACGAAGTCGCCCGGCTTTAGGCCCGTGGCCTGCGCGACCA 314406 Query 145772 TGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCG 145831 || || || || | |||| || |||||||||||||| || || ||||||||| | | Sbjct 314405 TGCGCGTGAGGAGCGCGTAGGACGCGATGTTGAAGGGCACGCCGAGGCCCATGTCCGCGG 314346 Query 145832 AGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGT 145891 | |||||||||| ||||||||||||||| ||| ||| |||||||||||||| | | || Sbjct 314345 ACCGCTGGTACATCTGGCAGGAGAGCTCGCCGTTCGCGACGTAGAACTGGCAGAACATGT 314286 Query 145892 GGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGA-GC 145950 |||| |||||||| ||||| || |||||||| |||||||| |||| ||||||| || Sbjct 314285 GGCACGGCGGCAGCGCCATCTCGTCGAGGTCCGCGGGGTTCCACGCGGACAGGACGATGC 314226 Query 145951 CTCCTGCTCTCGGGGTTCCT-CTTGAT-CTCCCCTATCAGGTCCCTGAGCTGGTCCACGC 146008 | | ||||| |||| |||||| || | |||| || |||||||||||||| Sbjct 314225 GCCGCGAGTTCGGG--TCCTGCTTGATGGTCTCGACGCAGG-CCGCGAGCTGGTCCACGC 314169 Query 146009 CCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGA 146068 ||| ||| ||| ||| | | ||| |||||| ||| |||||||| | |||||||| Sbjct 314168 CCTCGCCCGCGTAGTCTTTGTGCATGTCGACGTACTTGGCGCCGAAGTGGCGCCACTGGA 314109 Query 146069 ACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGA 146128 | ||||||||||| ||||||||| ||| | ||| ||||| || |||| |||||| Sbjct 314108 AGCCGTAGACGGGGCCCAGGTCCATCTCCTCGCGGTGGCCCAGGCCCCGCCGGTCGAGGA 314049 Query 146129 AGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCT---CGCGGAGAGCTCATTGG 146185 | || ||| ||||||| |||||||||| | || |||| | ||| |||| || Sbjct 314048 ACTCGCGGCTCCCGTTGCCGTCCCAGATGTGGATGCCCTTGTCCGCCAGGAGC---TTCC 313992 Query 146186 AGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCC 146245 || ||| ||||| || | |||||||| ||||| ||| ||| || | ||||||||| | Sbjct 313991 CGTTCGTCGACCCGCTCACGAACCAGACGAGCTCCTCGGCGACGCCGCGCCAGAAGACGC 313932 Query 146246 TCTTGGTGGTCAGCAGGGGGAACTGGCC---CCGCAG---GGAGTACTTGGCCTGGTCCC 146299 ||| || ||||||||||||||| || | ||| || | || || || | | | Sbjct 313931 GCTTCGTCGTCAGCAGGGGGAACCGGTCGTTCCGGAGGCTGAAGGACATG---CGCGCGC 313875 Query 146300 CGAAGACGGACAGGGTGCCCACGCCCGTCCTGTCCCCCCTGCGCACCCCGTTCGCCAGGA 146359 |||||| ||| | ||||||| |||||| | ||| || | ||| || ||| | |||| Sbjct 313874 CGAAGATGGAGATGGTGCCCGTGCCCGTGCGGTCGCCGCGGCGGACGCCGCGGTCGAGGA 313815 Query 146360 TCTCCCTGACGGTGTTGAGGTACTGGTGCTC 146390 |||| || | || ||||||||| | ||| Sbjct 313814 TCTCGGCGATGAGGTCGAGGTACTGCTTCTC 313784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590068059487400