Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq6 120 2e-22 seq26 109 4e-19 seq4 107 2e-18 seq2 107 2e-18 seq5 105 5e-18 seq240 104 2e-17 seq34 104 2e-17 seq10 104 2e-17 seq28 100 2e-16 >seq6 Length=2755913 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| |||||| || |||||||||||| | || || |||| || || || Sbjct 2370690 GTGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTCCGGCCGTCCTCGAGCTG 2370749 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||||||||| | |||||| ||||| || || | |||||||||||| ||||| Sbjct 2370750 CTTCCCGGCGAATATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGTATTTT 2370809 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 |||||| || | | | |||| | ||| || || | || |||||||| ||||| Sbjct 2370810 TTGCTTCACGTTGTCGATGGTGTCGCTCGGCTCGACGTCGAGCGTGATCGTCTTCCCCGT 2370869 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 ||| ||||| || || |||||||| Sbjct 2370870 CAGGGTCTTGACGAAAATTTGCAT 2370893 Score = 107 bits (118), Expect = 2e-18 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||||||||| ||| || || |||||||||||| |||| || |||| || || || Sbjct 2370918 GTGCAGCGTCGACTCTTTTTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTG 2370977 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || || | |||||| ||||| || || | ||||||||||| ||||| Sbjct 2370978 CTTCCCGGCAAAAATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCTTGGATTTT 2371037 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 |||||| || | | | |||| | ||| || || | || |||||||| ||||| Sbjct 2371038 TTGCTTCACGTTGTCGATGGTGTCGCTGGGCTCGACGTCGAGCGTGATCGTCTTCCCCGT 2371097 Query 45313 CAGAGTCTTCACAAAGATTTGC 45334 ||| ||||| || ||||| ||| Sbjct 2371098 CAGGGTCTTGACGAAGATCTGC 2371119 >seq26 Length=549629 Score = 109 bits (120), Expect = 4e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| | || ||| |||| || || || Sbjct 459825 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTG 459884 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| ||||| ||||| ||||| || || | |||||||||||| || || Sbjct 459885 CTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 459944 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||||| || | | |||| | ||| || || | || |||||||| || || Sbjct 459945 CTGCTTCACGTTGTCGATCGTGTCGCTGGGCTCGACGTCGAGCGTGATCGTCTTCCCGGT 460004 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| || ||||| |||||| || Sbjct 460005 GAGCGTCTTGACGAAGATCTGCATGGTG 460032 >seq4 Length=3024044 Score = 107 bits (118), Expect = 2e-18 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| | || || |||| || || || Sbjct 2039909 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTCCGGCCGTCCTCGAGCTG 2039968 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| ||||| ||||| ||||| || || | |||||||||||| || || Sbjct 2039969 CTTCCCCGCGAAGATCAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 2040028 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||||| || | | |||| | ||| || || | || |||||||||||||| Sbjct 2040029 CTGCTTCACGTTGTCGATCGTGTCGCTCGGCTCGACGTCGAGCGTGATCGTCTTGCCCGT 2040088 Query 45313 CAGAGTCTTCACAAAGATTTGC 45334 ||| || ||||| ||||| ||| Sbjct 2040089 CAGGGTTTTCACGAAGATCTGC 2040110 >seq2 Length=3465789 Score = 107 bits (118), Expect = 2e-18 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||||||||| ||||||||| |||||||||||| | || ||| |||| || || || Sbjct 660832 GTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTG 660891 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| || | ||||| ||||| || || | |||||||||||| || || Sbjct 660892 CTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 660951 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||||| || | | | |||| | ||| || || | || |||||||| ||||| Sbjct 660952 CTGCTTCACGTTGTCGATGGTGTCGCTGGGCTCGACATCGAGCGTGATCGTCTTCCCCGT 661011 Query 45313 CAGAGTCTTCACAAAGATTTGC 45334 ||| ||||| || || || ||| Sbjct 661012 CAGGGTCTTGACGAAAATCTGC 661033 Score = 102 bits (112), Expect = 6e-17 Identities = 100/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||||||||||||||| |||||||||||| | || ||| |||| || || || Sbjct 3141421 GTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTG 3141362 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| ||||| ||||| ||||| || || | |||||||||||| || || Sbjct 3141361 CTTCCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 3141302 Query 45253 TTGCTTAAC 45261 ||||| || Sbjct 3141301 CTGCTTCAC 3141293 >seq5 Length=3000003 Score = 105 bits (116), Expect = 5e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| | || ||| | || || || || Sbjct 733099 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCCTCGAGCTG 733158 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| |||| ||||| ||||| ||||| | |||||||||||| || || Sbjct 733159 CTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 733218 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||||| || | | |||| | ||| || || | || || ||||||||||| Sbjct 733219 CTGCTTCACGTTGTCGATCGTGTCGCTGGGCTCGACGTCGAGCGTGATGGTCTTGCCCGT 733278 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 || ||||| || ||||| |||||| || || Sbjct 733279 GAGCGTCTTGACGAAGATCTGCATGGTGGCT 733309 >seq240 Length=9970 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| | || ||| | || || || || Sbjct 1487 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCCTCGAGCTG 1428 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| |||| ||||| ||||| ||||| | |||||||||||| || || Sbjct 1427 CTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 1368 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||||| || | | ||||| |||||| || | || || || |||||||| Sbjct 1367 CTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCCACGTCGAGCGTGATGGTTTTGCCCGT 1308 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 1307 GAGCGTCTTGACGAAGATCTGCATG 1283 >seq34 Length=376640 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| | || ||| | || || || || Sbjct 72734 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCCTCGAGCTG 72793 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| |||| ||||| ||||| ||||| | |||||||||||| || || Sbjct 72794 CTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 72853 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||||| || | | ||||| |||||| || | || || || |||||||| Sbjct 72854 CTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCCACGTCGAGCGTGATGGTTTTGCCCGT 72913 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 72914 GAGCGTCTTGACGAAGATCTGCATG 72938 >seq10 Length=1654512 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| | || ||| |||| || || || Sbjct 861940 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTG 861999 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||| ||||| || || | |||||||||||| || || Sbjct 862000 CTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 862059 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||||| || | | ||||| ||| || || | || |||||||||||||| Sbjct 862060 CTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCGACGTCGAGCGTGATCGTCTTGCCCGT 862119 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 862120 GAGGGTCTTGACGAAGATCTGCATG 862144 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| | || ||| |||| || || || Sbjct 862168 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTG 862227 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||| ||||| || || | |||||||||||| || || Sbjct 862228 CTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 862287 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||||| || | | ||||| ||| || || | || |||||||||||||| Sbjct 862288 CTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCGACGTCGAGCGTGATCGTCTTGCCCGT 862347 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 862348 GAGGGTCTTGACGAAGATCTGCATG 862372 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| | || ||| |||| || || || Sbjct 862396 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTG 862455 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||| ||||| || || | |||||||||||| || || Sbjct 862456 CTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 862515 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||||| || | | ||||| ||| || || | || |||||||||||||| Sbjct 862516 CTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCGACGTCGAGCGTGATCGTCTTGCCCGT 862575 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 862576 GAGGGTCTTGACGAAGATCTGCATG 862600 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||||||||||||||| ||||||||||| || ||| |||| || || || Sbjct 862624 GTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTG 862683 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||| ||||| || || | |||||||||||| || || Sbjct 862684 CTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 862743 Query 45253 TTGCTTAAC 45261 ||||| || Sbjct 862744 CTGCTTCAC 862752 >seq28 Length=462849 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| | || ||| |||| || || || Sbjct 34749 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTG 34690 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||| ||||| || || | |||||||||||| || || Sbjct 34689 CTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 34630 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||||| || | | ||||| ||| || || | || |||||||| ||||| Sbjct 34629 CTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCGACGTCGAGCGTGATCGTCTTCCCCGT 34570 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 34569 GAGGGTCTTGACGAAGATCTGCATG 34545 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| | || ||| |||| || || || Sbjct 34192 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTG 34133 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||| || || ||||| | |||||||||||| || || Sbjct 34132 CTTGCCCGCGAAAATGAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 34073 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||||| || | | | |||| | ||| || || | || |||||||| || || Sbjct 34072 CTGCTTCACGTTATCGATGGTGTCGCTGGGCTCGACGTCGAGCGTGATCGTCTTACCGGT 34013 Query 45313 CAGAGTCTTCACAAAGATTTGC 45334 || || || || ||||| ||| Sbjct 34012 GAGCGTTTTGACGAAGATCTGC 33991 Score = 86.0 bits (94), Expect = 5e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| |||||||||||| | || ||| |||| || || || Sbjct 34521 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTG 34462 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||| || || ||||| | |||||||||||| || || Sbjct 34461 CTTGCCCGCGAAAATGAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 34402 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCC 45309 ||||| || | | | ||||| |||||| || | || ||||||||||| Sbjct 34401 CTGCTTCACGTTGTCGATGGTGTCCGAGGGCTCCACGTCGAGCGTGATCGTCTTGCC 34345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395069494249885