Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq30 226 2e-54 >seq30 Length=470201 Score = 226 bits (250), Expect = 2e-54 Identities = 454/659 (69%), Gaps = 27/659 (4%) Strand=Plus/Minus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 || |||||||| ||| ||||| ||||| || | | ||| || ||||| ||||| | Sbjct 314487 TCGACGTGGTTCGAGTAGACGTGCGCGTCGCCGATGACGTGGACGAAGTCGCCCGGCTTT 314428 Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 ||||||||| | || |||| || ||| ||||| |||||| |||||||| || || Sbjct 314427 AGGCCCGTGGCCTGCGCGACCATGCGCGTGAGGAGCGCGTAGGACGCGATGTTGAAGGGC 314368 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || |||||||||||||| ||||||| |||||||| ||||||||| ||||| || || Sbjct 314367 ACGCCGAGGCCCATGTCCGCGGACCGCTGGTACATCTGGCAGGAGAGCTCGCCGTTCGCG 314308 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGG 21170 ||||| ||||| || || | ||| || || || || |||||| |||||||||||||| Sbjct 314307 ACGTAGAACTGGCAGAACATGTGGCACGGCGGCAGCGCCATCTCGTCGAGGTCCGCGGGG 314248 Query 21171 TTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTG-TTAATTAGATCCAC-CA 21228 ||||||||| ||| ||||||||||| || || |||| || || || || || Sbjct 314247 TTCCACGCGGACAGGACGATGCGCCGCGAGTTCGG-GTCCTGCTTGATGGTCTCGACGCA 314189 Query 21229 CGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAG---TTG-GC--GTCGGCCCCCCTGT 21282 | || ||||||||||| |||| ||| ||||| ||| || |||| | || Sbjct 314188 GGCCGCG-AGCTGGTCCACGCCCTCGCCCGCGTAGTCTTTGTGCATGTCGAC------GT 314136 Query 21283 ACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGC 21342 ||| || || || || | ||||||||| ||||| || || ||||| || ||| || Sbjct 314135 ACTTGGCGCCGAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCCATCTCCTCGC 314076 Query 21343 GGTCCCCGAAGCCCTGCGCCG--CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTT 21400 ||| || | |||| ||||| | | || ||||| ||||| ||||||| || | Sbjct 314075 GGTGGCCCAGGCCC--CGCCGGTCGAGGAACTCGCGGCTCCCGTTGCCGTCCCAGATGTG 314018 Query 21401 TACGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTC 21460 | ||| | || ||| | || || || || || | ||||| | | ||| Sbjct 314017 GATGCCCTTGTCCGCCAGGAGCTTCCCGTTCGTCGACCCGCTCACGAACCAGACGAGCTC 313958 Query 21461 CTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAAC---TCGTCCCT 21517 ||| ||||||| | ||| || || | || || || | ||| || ||| |||| || Sbjct 313957 CTCGGCGACGCCGCGCCAGAAGACGCGCTTCGTCGTCAGCAGGGGGAACCGGTCGTTCCG 313898 Query 21518 GAGGTTATATCGGGCCTG-AAGC-CCGAACACGGACCTGGTGCCCACGCCCGTCCTGTC 21574 |||| | | || | || || ||||| | ||| |||||||| |||||| | ||| Sbjct 313897 GAGGCTGAA--GGACATGCGCGCGCCGAAGATGGAGATGGTGCCCGTGCCCGTGCGGTC 313841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427769821978800