Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq6 113 4e-20 >seq6 Length=2755913 Score = 113 bits (124), Expect = 4e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | || | || | ||| | ||| ||||||||||| ||||| || |||||| Sbjct 2370895 CCGCCGCGCAGCCGGAGCACGAGGTGCAGCGTCGACTCTTTTTGGATGTTGTAGTCGCTC 2370954 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||| |||||||| || || ||| | || || || ||||| || || || Sbjct 2370955 AGGGTCCGGCCGTCCTCGAGCTGCTTCCCGGCAAAAATGAGCCGCTGCTGGTCCGGCGGG 2371014 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||||||||| || | | || | |||||| ||||||| || Sbjct 2371015 ATGCCCTCCTTGTCTTGGATTTTTTGCTTCACGTTGTCGATGGTGTCGCTGGGCTCGACG 2371074 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGC 139762 || | || | |||||| || |||| || || ||||| || ||| Sbjct 2371075 TCGAGCGTGATCGTCTTCCCCGTCAGGGTCTTGACGAAGATCTGC 2371119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496056652052000