Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq9 109 8e-19 >seq9 Length=1602328 Score = 109 bits (120), Expect = 8e-19 Identities = 308/463 (67%), Gaps = 15/463 (3%) Strand=Plus/Plus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || || ||||| ||||||||||| || ||||| | || || |||||||| | Sbjct 1478137 ACAGCAGGCACGCGAAGTCGCAGTGCAGCCCTTCGTCCCGCGCGATGAGCTCGTTGGAGA 1478196 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 | | ||| |||||||| ||||| ||||| || ||||| || | || |||| || || Sbjct 1478197 AGGAGAGCCCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGACGG-CGCAGAAGCTGCCC 1478255 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAA-CAA--GTCTCTCTCCATAACTGGCG 50127 || ||||| || ||||| |||||||| || |||| ||| || || | | || ||| Sbjct 1478256 GAGAAGAAAATGCCTTCGACTGCGGCGAATGCAAGCAACCGT-TCGGTGAACGAC--GCG 1478312 Query 50128 CTGTCA---TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 50184 ||| | |||| | ||||| | |||||||| || || ||||| || Sbjct 1478313 TGATCAGGGTCGCACCACCGCAGCGCCCACTGGGCCTTCTCGGCCACGCACGGCATGGTG 1478372 Query 50185 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 50244 || ||||| | | | | || || | | || | || || ||||||| Sbjct 1478373 TCGATGGCCGTCAGGCACTCGTGCTTCTTCTGGGCGTCGCGGATGTACGTGTCGATCAGG 1478432 Query 50245 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 50304 || || || | || || || |||||||| ||||| ||||| || |||||||| || | Sbjct 1478433 AGGCTGTATACCTCAGAGTGGATGTTTTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGC 1478492 Query 50305 GCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC--AGCTAAATTTTCATTCACTATTC 50362 ||||||| |||||| || || || |||| |||||||| || || || || | Sbjct 1478493 GCCTCGGGCCACTGCACCTCCGTCGCGAA--GTTCTGGGCTAAATTCTCGTTGACGATGC 1478550 Query 50363 CGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATG 50405 |||| ||||| ||||| |||| || || || || || || Sbjct 1478551 CGTCGGACGCTGCGAAAAATGCCAGCACGTGCTTGATGAAGTG 1478593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718258160643400