Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_004084.1 Length=58498 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 2e-14 >seq2 Length=3465789 Score = 93.3 bits (102), Expect = 2e-14 Identities = 88/111 (79%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 51175 TCGT-CCAGGAGTACGCTTGGGCGATCCCGAACGAGGAGGCGATCGAGACGGTCGCCGAG 51233 |||| ||| |||||||| | ||| |||||| ||| | |||| |||| || |||||| | Sbjct 2519629 TCGTGCCACGAGTACGCCTACGCGGTCCCGAGCGACGGGGCGCTCGACGCGCTCGCCGCG 2519688 Query 51234 CACGCGCCGATCGTCGAGGTCGGCGCTGGCGCGGGCTACTGGGCGTGGTGC 51284 || ||| |||||||| ||||||| ||| ||||||||||||||| |||| Sbjct 2519689 GTCGGGCCCCTCGTCGAGATCGGCGCGGGCACGGGCTACTGGGCGTCGTGC 2519739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187069367546200