Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 5e-12 >seq6 Length=2755913 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || || |||| || | ||| | ||| | ||| ||||||||||| || ||||| || Sbjct 2370667 CCGCCGCGCAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTG 2370726 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | || | ||||||| ||||| || || || | || || | |||||| ||| || Sbjct 2370727 AGGGTCCGGCCGTCCTCGAGCTGCTTCCCGGCGAATATGAGCCGCTGCTGGTCCGGCGGG 2370786 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | |||||| ||||| ||||| || || || | | ||| || |||| ||||| Sbjct 2370787 ATGCCCTCCTTGTCCTGTATTTTTTGCTTCACGTTGTCGATGGTGTCGCTCGGCTCGACG 2370846 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 |||| || || || || || || | || ||||| ||||||||||| Sbjct 2370847 TCGAGCGTGATCGTCTTCCCCGTCAGGGTCTTGACGAAAATTTGCAT 2370893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414566812661890