Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq28 86.0 5e-12 >seq28 Length=462849 Score = 86.0 bits (94), Expect = 5e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGT 48593 |||||| || |||||||| || || | || || ||||||| |||||||| || || Sbjct 34180 CTCCTTCTGGATGTTGTAGTC-GCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGA 34122 Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653 |||| | |||||||||||| || | | ||||||||| || |||||||| | Sbjct 34121 AAATGAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGT 34062 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | ||||| ||| | | ||| |||| || || || ||||||||||| ||||| | Sbjct 34061 TATCGATGGTGTCGCTGGGCTCGACGTCGAGCGTGATCGTCTTACCGGTGAGCGTTTTGA 34002 Query 48714 CAAAAATCTGC 48724 | || |||||| Sbjct 34001 CGAAGATCTGC 33991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421245116211185