Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq9 109 5e-19 >seq9 Length=1602328 Score = 109 bits (120), Expect = 5e-19 Identities = 193/270 (71%), Gaps = 20/270 (7%) Strand=Plus/Minus Query 94136 ACGACGGCGCGCACGAGCCGCGCCCAGCCGAGCGGGGCGTGGGAGCCGGGGACCCCGCGC 94195 ||||||||| | || ||| |||||||| | | || || || | | || ||| | Sbjct 592870 ACGACGGCGTCCGTCAGGCGCTCCCAGCCGCG---GCCGCGGTGGCTGTGCGCCTCGCCC 592814 Query 94196 ---CGCACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCC-AG 94251 ||||| ||||||| ||||| ||||| ||||| || || ||||||| ||||| || Sbjct 592813 TCGCGCACCGTCAGCGCGGTGTTGAGCAGGAGCACGCCCTGGTCCGCCCAG-CCTCCGAG 592755 Query 94252 GCAGCCGTGGGCGGGCGCGGGCAGCGTCGGGTACGTCGCCCGGACCGCCGCGAAG-ATGT 94310 | |||| ||| ||||||| || || | | ||| | | || |||| || | || Sbjct 592754 GTCGCCGCCGGCCGGCGCGG----CGCCGTGGTCCTCGGC-GCACT--CGCGCAGCACGT 592702 Query 94311 TGGCCAGGCTCGGGGGGATCGGCACCCCGCGCCGGA--CGCTGAAGGCCAGCCCGTGGGC 94368 || ||| ||||||||| ||| | | ||||||| |||||||||| || |||| ||| Sbjct 592701 TGCGGAGGGACGGGGGGAT-GGCGCAGC-CGCCGGAGACGCTGAAGGCGAGGCCGTTGGC 592644 Query 94369 CTGGCCCGGCCCGTGGTACGGGTCCTGGCC 94398 |||||| || ||||||||||||||||| || Sbjct 592643 CTGGCCGGGGCCGTGGTACGGGTCCTGCCC 592614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458940401844600