Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq28 91.5 1e-13 seq6 86.0 6e-12 >seq28 Length=462849 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 || || ||||| | || || || ||||||| |||| | || | | |||||||||| Sbjct 33998 TTCGTCAAAACGCTCACCGGTAAGACGATCACGCTCGACGTCGAGCCCAGCGACACCATC 34057 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | || || || ||||| ||||| || || || ||||| ||||| || | ||| Sbjct 34058 GATAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATCCCTCCGGATCAGCAGCGCCTC 34117 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 |||| || ||||| || ||||| || | | | |||||||||| ||||| || || Sbjct 34118 ATTTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACGCTCAGCGACTACAACATCCAGAAG 34177 Query 26958 GAATCTACTATCCATCTGGTCCT 26980 || || || |||| || ||||| Sbjct 34178 GAGTCGACGCTCCACCTCGTCCT 34200 >seq6 Length=2755913 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || || || ||||||| |||| | || | | | Sbjct 2370893 ATGCAAATTTTCGTCAAGACCCTGACGGGGAAGACGATCACGCTCGACGTCGAGCCGAGC 2370834 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || ||||| || ||||| || || || || || || || Sbjct 2370833 GACACCATCGACAACGTGAAGCAAAAAATACAGGACAAGGAGGGCATCCCGCCGGACCAG 2370774 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | || ||| || || ||||| || | | | | |||||||||| ||| Sbjct 2370773 CAGCGGCTCATATTCGCCGGGAAGCAGCTCGAGGACGGCCGGACCCTCAGCGACTACAAC 2370714 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| || || || |||| || || || Sbjct 2370713 ATCCAAAAGGAGTCGACGCTCCACCTCGTGCT 2370682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478655309813200