Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6 111 1e-19 >seq6 Length=2755913 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 25001 GCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGA 25060 ||| || || || ||||| |||| || || | ||||| |||| || ||| | || Sbjct 2371119 GCAGATCTTCGTCAAGACCCTGACGGGGAAGACGATCACGCTCGACGTCGAGCCCAGCGA 2371060 Query 25061 CACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACA 25120 ||| ||||| |||||||||||||| ||||| || || || || || ||||| || Sbjct 2371059 CACCATCGACAACGTGAAGCAAAAAATCCAAGACAAGGAGGGCATCCCGCCGGACCAGCA 2371000 Query 25121 GCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATAT 25180 |||| | ||||||||||| || || | || || | || || || |||| ||||| || Sbjct 2370999 GCGGCTCATTTTTGCCGGGAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACAT 2370940 Query 25181 TCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||||||| || ||||| || | ||||| |||| Sbjct 2370939 CCAAAAAGAGTCGACGCTGCACCTCGTGCTCCGGCT 2370904 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| |||| || || | ||||| |||| || ||| || Sbjct 2370893 ATGCAAATTTTCGTCAAGACCCTGACGGGGAAGACGATCACGCTCGACGTCGAGCCGAGC 2370834 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||||||||||| ||||| || || || || || ||||| Sbjct 2370833 GACACCATCGACAACGTGAAGCAAAAAATACAGGACAAGGAGGGCATCCCGCCGGACCAG 2370774 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 |||||| | || || ||||| || || | || || | || || | |||| ||||| Sbjct 2370773 CAGCGGCTCATATTCGCCGGGAAGCAGCTCGAGGACGGCCGGACCCTCAGCGACTACAAC 2370714 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || ||||| || || ||||| || | ||||| |||| Sbjct 2370713 ATCCAAAAGGAGTCGACGCTCCACCTCGTGCTCCGGCT 2370676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433321741795775