Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq30 120 3e-22 >seq30 Length=470201 Score = 120 bits (132), Expect = 3e-22 Identities = 361/549 (66%), Gaps = 15/549 (3%) Strand=Plus/Minus Query 20282 GCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAA 20341 || ||||| || || || || | |||||||| | |||| ||| |||| ||| ||||| Sbjct 314382 GCGATGTTGAAGGGCACGCCGAGGCCCATGTCCGCGGACCGCTGGTACATCTGGCAGGAG 314323 Query 20342 AGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAAC 20401 ||||| |||| || || || || || || |||| ||| || ||||| ||||||||| | Sbjct 314322 AGCTCGCCGTTCGCGACGTAGAACTGGCAGAACATGTGGCACGGCGGCAGCGCCATCT-C 314264 Query 20402 GACAAG-TCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTT 20460 | | || ||||| ||||||||||| ||| | ||| | | || ||| | | || Sbjct 314263 GTCGAGGTCCGCGGGGTTCCACGCGGACAGGACGATGCGCCGCGAGTTCGGGTCCTGCTT 314204 Query 20461 TATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGC 20520 || || || | || | ||||| | |||| ||| | ||||| | | Sbjct 314203 GATGGTCTCGACGCAGGCCGCGAGCTGGTCCACGCCCTCGCCCGCGTAGTCTTTGTGCAT 314144 Query 20521 GTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 ||| |||||| || || ||||| | ||||||||| ||||| || || |||| ||| Sbjct 314143 GTCGACGTACTTGGCGCCGAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCCAT 314084 Query 20581 CTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCA 20640 |||| | ||| ||||||| |||| | | |||||||| | | || || |||||| Sbjct 314083 CTCCTCGCGGTGGCCCAGGCCCCGCCGGTCGAGGAACTCGCGGCTCCCGTTGCCGTCCCA 314024 Query 20641 TATCTTGA--CTCCTGTTCTTGA-AAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCA 20697 || | || | | ||| | | |||| || || || ||| ||| ||||| Sbjct 314023 GATGTGGATGCCCTTGTCCGCCAGGAGCTTCC---CGTTCGTCGACCCGCTCACGAACCA 313967 Query 20698 AAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAA--- 20754 | ||||| | | ||||| ||||| || || ||||| || || || | ||| || Sbjct 313966 GACGAGCTCCTCGGCGACGCCGCGCCAGAAGACGCGCTTCGTCGTCAGCAGGGGGAACCG 313907 Query 20755 GTGGTCCCGCAGACT--ATACCTGGCCTGCATGCCAAATAGAGAGAGGGTGCCTATGCCG 20812 || || ||| || || | | || || ||| || | |||| |||||| |||| Sbjct 313906 GTCGTTCCGGAGGCTGAAGGACATGC--GCGCGCCGAAGATGGAGATGGTGCCCGTGCCC 313849 Query 20813 GTGCGGTCG 20821 ||||||||| Sbjct 313848 GTGCGGTCG 313840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441366262165400