Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq6 87.8 1e-12 seq10 84.2 2e-11 >seq6 Length=2755913 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | |||||| ||||| || || ||||| |||||| || |||||||| || || Sbjct 2370667 CCGCCGCGCAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTTTGGATGTTGTAGTC-GCT 2370725 Query 33961 AATTGTC-GCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | ||| | |||| || | ||||| ||||| ||||| || |||||||| ||| ||| Sbjct 2370726 GAGGGTCCGGCCGTCCTCGAGCTGCTTCCCGGCGAATATGAGCCGCTGCTGGTCCGGCGG 2370785 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTT 34049 | || ||| |||||| ||||||||||| Sbjct 2370786 GATGCCCTCCTTGTCCTGTATTTTTTGCTT 2370815 >seq10 Length=1654512 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | |||||| ||||| || || ||||||||||| ||||| |||||||| || | Sbjct 452712 CCGCCGCGCAGCCGGAGCACGAGGTGCAGCGTGCTCTCTTTCTGGATGTTGTAGTCGGAG 452653 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| || | |||||||| ||||| || ||||| ||||| ||| || Sbjct 452652 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAAATGAGGCGTTGCTGGTCCGGGGGG 452593 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTT 34049 | || ||| |||||| || || ||||| Sbjct 452592 ATGCCCTCCTTGTCCTGGATCTTCTGCTT 452564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397056665550370