Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq16 141 2e-28 >seq16 Length=966663 Score = 141 bits (156), Expect = 2e-28 Identities = 305/451 (68%), Gaps = 4/451 (1%) Strand=Plus/Plus Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345 || || || ||||| || |||||| | | ||| || || || | || ||||| Sbjct 488839 TCCTTCGCGGAGCGCATCATCGCCTTCGCGGCCGTCGAGGGCATCTTCTTCTCCGGCTCG 488898 Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405 |||||||| |||| ||||| ||| || | ||||| |||||| | || ||| Sbjct 488899 TTCTGCGCGGTCTTCTGGCTCAAGAAGCGGGGCCTCATGCCCGGCCTCTCCTTCTCCAAC 488958 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCG-GTGAGCTTATGTATTCAAA 243464 ||| ||||| |||||||||||| | ||| | |||| ||| || | || || || Sbjct 488959 GAGCTCATCTCCCGCGACGAGGGCATGCACTGCGACTTCGCGTG-CCTCCTCTACTCGAA 489017 Query 243465 GCTCCAGAACAAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAA 243524 ||||| ||||||||| || |||| ||| |||| ||||| || || || | Sbjct 489018 GCTCCGGAACAAGCTCCCCGTCGAGACGATCAACGCGCTCATCGGCGACGCGGTGACCAT 489077 Query 243525 CGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTC-TGAAC 243583 ||| ||||| ||| | | ||| | || ||| || ||||||||||| | || Sbjct 489078 CGAGAAGGAGTTCGTCGTCTCCGCGCTGCCCGTGGAGCTCATCGGCATGAACTCGCGGAC 489137 Query 243584 TCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGA 243643 |||| | ||||||||||| ||| || ||||| | || ||||||| || | || Sbjct 489138 -CATGTGCCAGTACATCGAGTTCTGCGCGGACCGGCTCCTCCTCGCGCTCGGCTGCCCGA 489196 Query 243644 AAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAA 243703 | | ||| | | | ||||||||| | || ||||||||||| ||||| || || || | Sbjct 489197 AGCTCTACGAAGCGACGAACCCCTTCGACTGGATGGAGCTCATCTCGCTCCAGGGCAAGA 489256 Query 243704 CTAACTTCTTCGAAAAGCGTGTCAGTGATTA 243734 | ||||||||||| ||||| ||| | || || Sbjct 489257 CGAACTTCTTCGAGAAGCGCGTCGGCGAGTA 489287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102863255179750