Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq38 87.8 1e-12 >seq38 Length=407180 Score = 87.8 bits (96), Expect = 1e-12 Identities = 130/180 (72%), Gaps = 7/180 (4%) Strand=Plus/Plus Query 108781 CTCAACTTTACGTGGCTGGTCAATTCGGCGGCGCACATGTACGGCGACCGTCCGTTCGAC 108840 ||| ||| |||||||| ||||| || ||||||||| | | |||||||| || | |||| Sbjct 379074 CTCCACTGCACGTGGCTCGTCAACTCCGCGGCGCACTTCTTCGGCGACCACCCCTACGAC 379133 Query 108841 AAGAACATTTTCCCAAGAGAAAACAAATTGGTGGCGGCGTTGGCTC--TCGGCGAGGGAT 108898 || || | ||| | || ||| || ||| || | | ||| |||||||||| | Sbjct 379134 --GACCAGTGGCCCGCG-GAGAACCCCTTCGTGA--GCCTCGCCTCCATCGGCGAGGGCT 379188 Query 108899 GGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTGGGGAACGACT 108958 ||||||||| |||||| || ||||||||||||| ||| | ||||| || | || || Sbjct 379189 GGCACAACTGGCACCACAAGTACCCCTACGACTACGCGGCGTCGGAGTTCGGCATCGGCT 379248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381767286365640