Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq30 80.6 9e-11 >seq30 Length=470201 Score = 80.6 bits (88), Expect = 9e-11 Identities = 125/177 (71%), Gaps = 4/177 (2%) Strand=Plus/Plus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||| |||| ||||||| | |||||||| ||||||| | |||||||||||| | Sbjct 314313 ACGGCGAGCTCTCCTGCCAGATGTACCAGCGGTCCGCGGACATGGGCCTCGGCGTGCCCT 314372 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCG--GACCAGCTCGGACTGAA 24937 |||| |||||| ||||||||| || || | | ||||| | ||| || || || Sbjct 314373 TCAACATCGCGTCCTACGCGCTCCTCACGCGCATGGTCGCGCAGGCCA--CGGGCCTAAA 314430 Query 24938 GGTCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGA 24994 | ||||| ||| || | |||||||| ||| | || |||||||||||||| Sbjct 314431 GCCGGGCGACTTCGTCCACGTCATCGGCGACGCGCACGTCTACTCGAACCACGTCGA 314487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164170489780880