Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq319 98.7 1e-15 seq15 98.7 1e-15 >seq319 Length=7879 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/151 (75%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 132103 GTCAGCCAGG-GCAGGCGCGGGTCGAGGTTCTCGACGCTGATCAGCGCGTTCTTGACCGG 132161 || |||||| ||| || |||||| |||||||||| | || ||| ||||||| | Sbjct 1929 GTGAGCCAGAAGCACGC-CGGGTCCGTGTTCTCGACGGTCATGAGCACGTTCTTCGCGCC 1987 Query 132162 GATCATCATGCCCTCGGGCACGGCCTTGATCCGCAGCGGCAGGTAGCCGCCGTACTCGTT 132221 || | | ||||||||||| |||||||||| ||||||||||| |||||||| || | Sbjct 1988 GACGACCGTGCCCTCGGGCGCGGCCTTGATGCGCAGCGGCAGCCGGCCGCCGTGCTTCTC 2047 Query 132222 CAGGATGATCTCCCAGCCGTCACGGTTGAAC 132252 |||||| ||||||||| | ||||| ||| Sbjct 2048 GAGGATGTGCTCCCAGCCCGCGCGGTTAAAC 2078 >seq15 Length=987846 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/151 (75%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 132103 GTCAGCCAGG-GCAGGCGCGGGTCGAGGTTCTCGACGCTGATCAGCGCGTTCTTGACCGG 132161 || |||||| ||| || |||||| |||||||||| | || ||| ||||||| | Sbjct 473601 GTGAGCCAGAAGCACGC-CGGGTCCGTGTTCTCGACGGTCATGAGCACGTTCTTCGCGCC 473543 Query 132162 GATCATCATGCCCTCGGGCACGGCCTTGATCCGCAGCGGCAGGTAGCCGCCGTACTCGTT 132221 || | | ||||||||||| |||||||||| ||||||||||| |||||||| || | Sbjct 473542 GACGACCGTGCCCTCGGGCGCGGCCTTGATGCGCAGCGGCAGCCGGCCGCCGTGCTTCTC 473483 Query 132222 CAGGATGATCTCCCAGCCGTCACGGTTGAAC 132252 |||||| ||||||||| | ||||| ||| Sbjct 473482 GAGGATGTGCTCCCAGCCCGCGCGGTTAAAC 473452 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/151 (75%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 132103 GTCAGCCAGG-GCAGGCGCGGGTCGAGGTTCTCGACGCTGATCAGCGCGTTCTTGACCGG 132161 || |||||| ||| || |||||| |||||||||| | || ||| ||||||| | Sbjct 475332 GTGAGCCAGAAGCACGC-CGGGTCCGTGTTCTCGACGGTCATGAGCACGTTCTTCGCGCC 475274 Query 132162 GATCATCATGCCCTCGGGCACGGCCTTGATCCGCAGCGGCAGGTAGCCGCCGTACTCGTT 132221 || | | ||||||||||| |||||||||| ||||||||||| |||||||| || | Sbjct 475273 GACGACCGTGCCCTCGGGCGCGGCCTTGATGCGCAGCGGCAGCCGGCCGCCGTGCTTCTC 475214 Query 132222 CAGGATGATCTCCCAGCCGTCACGGTTGAAC 132252 |||||| ||||||||| | ||||| ||| Sbjct 475213 GAGGATGTGCTCCCAGCCCGCGCGGTTAAAC 475183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715765397568000