Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_024771.1 Length=151601 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 6e-12 >seq9 Length=1602328 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/211 (71%), Gaps = 12/211 (6%) Strand=Plus/Minus Query 107328 CGCACCGTGAGCGTCGTGTTGATGAGGAGCACCCCCTGGAGGGCCCACTTTTCCAGGTAG 107387 |||||||| |||| ||||||| |||||||| |||||| ||||| | | |||| | Sbjct 592810 CGCACCGTCAGCGCGGTGTTGAGCAGGAGCACGCCCTGGTCCGCCCAGCCTCCGAGGTCG 592751 Query 107388 CCGTGGGCGGG-GAGGCGAAATGCCGGGTAGGTCTTTTGCACCGCCGCGTAG-ATGTTGC 107445 ||| ||| || | |||| ||| | ||| | || | |||| || | ||||| Sbjct 592750 CCGCCGGCCGGCGCGGCG-----CCGTG---GTCCTCGGCGCACTCGCGCAGCACGTTGC 592699 Query 107446 GCAGGCTTGGGGGAACTG-GCACCCCCTTTCGCACGCTGAAAGCCAGCCCGTGCGCCTGG 107504 | ||| ||||| | | ||| || | | |||||||| || || |||| |||||| Sbjct 592698 GGAGGGACGGGGGGATGGCGCAGCCGCCGGAG-ACGCTGAAGGCGAGGCCGTTGGCCTGG 592640 Query 107505 CCGGGGCCGTGGTAGGGGTCCTGGCCGACGA 107535 |||||||||||||| |||||||| || |||| Sbjct 592639 CCGGGGCCGTGGTACGGGTCCTGCCCCACGA 592609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484988016008600