Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq30 132 5e-26 >seq30 Length=470201 Score = 132 bits (146), Expect = 5e-26 Identities = 193/265 (73%), Gaps = 17/265 (6%) Strand=Plus/Plus Query 142550 CTCGTCGTCACATCGTCA---CCGCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTC 142606 |||| || | ||||||| ||||||||||||| || || ||||||| ||||| || | Sbjct 314218 CTCG-CGGCGCATCGTCCTGTCCGCGTGGAACCCCGCGGACCTCGACGAGATGGCGCTGC 314276 Query 142607 CTCCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAGAAGCG-TCTGTCATGCCAG 142665 | ||||| |||||| | | ||| ||| |||||| |||| ||| || || |||||| Sbjct 314277 CGCCGTGCCACATGTTCTGCCAGTTCTACGTCG---CGAA-CGGCGAGCTCTCCTGCCAG 314332 Query 142666 CTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCG 142725 |||| ||||| || || ||| | ||||||||| || |||||||| || || |||||| Sbjct 314333 ATGTACCAGCGGTCCGCGGACATGGGCCTCGGCGTGCCCTTCAACATCGCGTCCTACGCG 314392 Query 142726 CTTCTCACACAGCTCATTGCTCGCGAATGC----GGTCTGGAACTCGGAGACTTCGTCCA 142781 || ||||| || || || ||||| | || || || | | || ||||||||||| Sbjct 314393 CTCCTCAC---GCGCA-TGGTCGCGCAGGCCACGGGCCTAAAGCCGGGCGACTTCGTCCA 314448 Query 142782 CACCTTCGGCAATTCGCACATCTAC 142806 | | ||||| | ||||| ||||| Sbjct 314449 CGTCATCGGCGACGCGCACGTCTAC 314473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500491786355600