Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq9 149 6e-31 >seq9 Length=1602328 Score = 149 bits (164), Expect = 6e-31 Identities = 194/265 (73%), Gaps = 5/265 (2%) Strand=Plus/Minus Query 5257 ACGCCCGTGGACCCGAATCCCGAGGAGCCGCGCGTCGTGGAGGGCATGCCCTCCACCTCC 5316 ||||||||||||||||| || || |||||| ||||| | |||| || | |||||| Sbjct 1246408 ACGCCCGTGGACCCGAAGCCGCCGGCGCCGCGGGTCGTCGCCGGCAGCTCCGCGACCTCC 1246349 Query 5317 ATGATGCACGG--TCG--GCAGAAGCACTCGCAGATGAGCTGCGCCACGCGGTCGCCTCG 5372 || | ||| ||| | || |||| ||||||||| || ||||||||||| | Sbjct 1246348 TCGAC-CTCGGCGTCGAGGTGGACCTTCTCGAGGATGAGCTGGGCGACGCGGTCGCCGGG 1246290 Query 5373 CCGCACCACGAAGGTCTCTTGGCCGAAGTTGAAGAGCACCACTCCCAGGTTCCCTCGGAA 5432 | |||| ||||| | | | |||| |||||||||||| || || | | || ||| | Sbjct 1246289 GCTCACCTCGAAGTCCGCGTCGCCGTGGTTGAAGAGCACGACGCCGACGGCGCCGCGGTA 1246230 Query 5433 GTCCGGGTCCACGACGCCCGCTCCCACATCCACGAAGTTGTTTACCGCGAGACCGGACCT 5492 ||| | ||| ||||||||||| || || || ||||| || || |||||||| ||||||| Sbjct 1246229 GTCGGCGTCGACGACGCCCGCGCCGACGTCGACGAACTTCTTGACCGCGAGGCCGGACCG 1246170 Query 5493 CGGCGCCACGCGACCGTAGCAGCCG 5517 |||||| | ||| |||||||| || Sbjct 1246169 CGGCGCGATGCGCGCGTAGCAGTCG 1246145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447804566796600