Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq16 87.8 2e-12 >seq16 Length=966663 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 110728 GTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTTTAAGAAAGAATCGTTC 110787 ||| |||||| |||||| || ||||| || ||||| ||||| || | ||| || || Sbjct 488607 GTTGACGATGCCGTCGGACGCCGCGAAGAACGCGAGCACGTGCTTGATGAAGTGGCGCTC 488548 Query 110788 CTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACATGTCGATCTCTTCGAC 110847 ||||||||| || || | || |||||| | | ||| | | | | ||||||||| || | Sbjct 488547 CTTGTCGTTGAGCTTCTGGTCCCAGTCCTTGATGTCGTGGCAGAGGTCGATCTCCTCCGC 488488 Query 110848 CTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGATCTTCATTCACGATCGG 110907 | ||||| | | |||||||||||||| ||||| | || || | | |||| || Sbjct 488487 CGTCCAGAACGACGCCTCCGCCTTCTTGTACATCTGCCAGACGTCGTCGTGCTCGATGGG 488428 Query 110908 CAA 110910 || Sbjct 488427 GAA 488425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445087807039200