Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq30 354 9e-93 >seq30 Length=470201 Score = 354 bits (392), Expect = 9e-93 Identities = 539/752 (72%), Gaps = 24/752 (3%) Strand=Plus/Minus Query 146770 TCCTAAACCGCCAGCGCCATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGGCAAAA 146829 ||||| || |||| | |||| ||| ||||| || | ||||||||||| || || Sbjct 314643 TCCTAGACGGCCATCTTCATGTCGATCTTGGGGTAGGGCTTGTAGCCCTCGACGGTGAAG 314584 Query 146830 TCTTCTGCCCTGAAATCGTCTATGTCC-TCCAC-CCGCCTCAAAATCTTGAGCTTGGGGA 146887 || | | ||| ||||| ||| || || | ||| | | | ||||| | |||| Sbjct 314583 TCGGCGAACTCGAAGTCGTCGATGCCCGTCTTCGCCGGGTTGA--TTGTGAGCGTCGGGA 314526 Query 146888 AGGGTCGGGGGTTCC--TGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGAC 146945 |||| ||||| | | ||| ||||| | || || | || |||||||| |||||| Sbjct 314525 AGGGCCGGGGCTCGCGCTGG--AGCTGGACCTTGAGCGCGTCGACGTGGTTCGAGTAGAC 314468 Query 146946 GTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCAC 147005 ||||||||| || | | ||| || ||||| |||||||| ||||| || | || || || Sbjct 314467 GTGCGCGTCGCCGATGACGTGGACGAAGTCGCCCGGCTTTAGGCCCGTGGCCTGCGCGAC 314408 Query 147006 CATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCC 147065 |||| ||||| |||| |||| || ||||||||||| || || |||||||||||| | Sbjct 314407 CATGCGCGTGAGGAGCGCGTAGGACGCGATGTTGAAGGGCACGCCGAGGCCCATGTCCGC 314348 Query 147066 CGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGAT 147125 |||| |||||||| |||||| |||||||| |||| || ||||| |||||||| | || Sbjct 314347 GGACCGCTGGTACATCTGGCAGGAGAGCTCGCCGTTCGCGACGTAGAACTGGCAGAACAT 314288 Query 147126 GTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAG 147185 ||||||||||||||||||||| || ||||||||||||||||| || || | || | Sbjct 314287 GTGGCACGGCGGCAGCGCCATCTCGTCGAGGTCCGCGGGGTTCCACGCGGACAGGACGAT 314228 Query 147186 CCGCC-TGCTCTCGGGGTTCCT-CTTAATCTCTTCGATAACCCA--CCTC-AGCTGGTCC 147240 |||| | ||||| |||| ||| || ||| || || || | ||||||||| Sbjct 314227 GCGCCGCGAGTTCGGG--TCCTGCTTGATGGTCTCG---ACGCAGGCCGCGAGCTGGTCC 314173 Query 147241 ACGCCCTGGCCCCCGTAG--TTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGTGCCTC 147297 ||||||| |||| ||||| ||||| ||| ||| |||||| |||| || ||||| | | Sbjct 314172 ACGCCCTCGCCCGCGTAGTCTTTGT---GCATGTCGACGTACTTGGCGCCGAAGTGGCGC 314116 Query 147298 CACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC 147357 |||||||||||||| || || |||||||| || | ||| | |||| ||| Sbjct 314115 CACTGGAAGCCGTAGACGGGGCCCAGGTCCATCTCCTCGCGGTGGCCCAGGCCCCGCCGG 314056 Query 147358 TTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCC 147417 | ||| |||||| || ||||| | ||||||||||| | |||||| | | || | Sbjct 314055 TCGAGGAACTCGCGGCTCCCGTTGCCGTCCCAGATGTGGATGCCCTTGTCCGCCAGGAGC 313996 Query 147418 TTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAG 147477 || || ||| || || | | |||||||| |||||||| || || | ||| ||| Sbjct 313995 TTCCCGTTCGTCGACCCGCTCACGAACCAGACGAGCTCCTCGGCGACGCCGCGCCAGAAG 313936 Query 147478 ACCCTCTTGGTGGTCAGCAGGGGGAACTGGTC 147509 || | ||| || ||||||||||||||| |||| Sbjct 313935 ACGCGCTTCGTCGTCAGCAGGGGGAACCGGTC 313904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583479357084000