Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq6 122 7e-23 seq2 105 6e-18 seq28 104 2e-17 seq10 104 2e-17 seq240 96.9 3e-15 seq34 96.9 3e-15 seq4 96.9 3e-15 seq26 91.5 1e-13 seq5 91.5 1e-13 >seq6 Length=2755913 Score = 122 bits (134), Expect = 7e-23 Identities = 162/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| ||| | || | || | ||| || |||||||| || |||||||||||| Sbjct 2370895 CCGCCGCGCAGCCGGAGCACGAGGTGCAGCGTCGACTCTTTTTGGATGTTGTAGTCGCTC 2370954 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||| |||||||| || ||||| ||||||| ||||| || |||||||| Sbjct 2370955 AGGGTCCGGCCGTCCTCGAGCTGCTTCCCGGCAAAAATGAGCCGCTGCTGGTCCGGCGGG 2371014 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||| || | |||| | | || | ||||| ||| || || Sbjct 2371015 ATGCCCTCCTTGTCTTGGATTTTTTGCTTCACGTTGTCGATGGTGTCGCTGGGCTCGACG 2371074 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGC 27245 || || || || | || |||||||| || || || ||||| ||| Sbjct 2371075 TCGAGCGTGATCGTCTTCCCCGTCAGGGTCTTGACGAAGATCTGC 2371119 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||||| ||| | || | || | ||| || || ||||| || ||||||||||| Sbjct 2370666 GCCGCCGCGCAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCT 2370725 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | | || |||| |||||||| || |||||| | ||||| ||||| || |||||||| Sbjct 2370726 GAGGGTCCGGCCGTCCTCGAGCTGCTTCCCGGCGAATATGAGCCGCTGCTGGTCCGGCGG 2370785 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || || || | |||| | | || | ||||| | | || || Sbjct 2370786 GATGCCCTCCTTGTCCTGTATTTTTTGCTTCACGTTGTCGATGGTGTCGCTCGGCTCGAC 2370845 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || |||||||| || || || || |||||||| Sbjct 2370846 GTCGAGCGTGATCGTCTTCCCCGTCAGGGTCTTGACGAAAATTTGCAT 2370893 >seq2 Length=3465789 Score = 105 bits (116), Expect = 6e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||||| ||| | || | || | ||| || || || || || ||||||||||| Sbjct 660808 GCCGCCGCGCAGCCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 660867 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| |||| |||||||| || |||||| | ||||| ||||| || ||||| || Sbjct 660868 GAGCGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 660927 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || |||||| | |||| | | || | ||||| ||| || || Sbjct 660928 GATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCGATGGTGTCGCTGGGCTCGAC 660987 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGC 27245 || || || || | || |||||||| || || || || || ||| Sbjct 660988 ATCGAGCGTGATCGTCTTCCCCGTCAGGGTCTTGACGAAAATCTGC 661033 >seq28 Length=462849 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||| | || | || | || | ||| || || || || || |||||||||| Sbjct 34217 TGCCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 34158 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| |||| |||||||| || || ||| ||||||| ||||| |||||||| | Sbjct 34157 TGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATGAGGCGCTGCTGATCCGGAG 34098 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || |||||| | |||| | | || | ||||| ||| || | Sbjct 34097 GGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTATCGATGGTGTCGCTGGGCTCGA 34038 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGC 27245 | || || || || | || || || || ||||| || ||||| ||| Sbjct 34037 CGTCGAGCGTGATCGTCTTACCGGTGAGCGTTTTGACGAAGATCTGC 33991 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 ||||| ||||| | || | || | || | ||| || || || || || ||||||||| Sbjct 34775 TTGCCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 34716 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | |||| |||| |||||||| || || ||| | ||||| ||||| || ||||| Sbjct 34715 CTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGG 34656 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||||| || || |||||| | |||| | | || | ||||| | || || Sbjct 34655 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCG 34596 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || | || ||||| || || || || ||||| ||||| Sbjct 34595 ACGTCGAGCGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 34546 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||| | || | || | || | ||| || || || || || |||||||||| Sbjct 34546 TGCCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 34487 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| |||| |||||||| || || ||| ||||||| ||||| |||||||| | Sbjct 34486 TGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAAATGAGGCGCTGCTGATCCGGAG 34427 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || |||||| | |||| | | || | ||||| | || || | Sbjct 34426 GGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCGATGGTGTCCGAGGGCTCCA 34367 Query 27199 CTTCTAGAGTTATAGATTTGCC 27220 | || || || || | ||||| Sbjct 34366 CGTCGAGCGTGATCGTCTTGCC 34345 >seq10 Length=1654512 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 ||||| ||||| | || | || | || | ||| || || || || || ||||||||| Sbjct 861914 TTGCCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 861973 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | |||| |||| |||||||| || || ||| | ||||| ||||| || ||||| Sbjct 861974 CTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGG 862033 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||||| || || |||||| | |||| | | || | ||||| | || || Sbjct 862034 GGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCG 862093 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || | |||||||| || || || || ||||| ||||| Sbjct 862094 ACGTCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 862143 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||| | || | || | || | ||| || || || || || |||||||||| Sbjct 862143 TGCCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 862202 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| |||| |||||||| || || ||| | ||||| ||||| || ||||| | Sbjct 862203 TGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGG 862262 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || |||||| | |||| | | || | ||||| | || || | Sbjct 862263 GGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCGA 862322 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | |||||||| || || || || ||||| ||||| Sbjct 862323 CGTCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 862371 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||| | || | || | || | ||| || || || || || |||||||||| Sbjct 862371 TGCCGCCGCGGAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 862430 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| |||| |||||||| || || ||| | ||||| ||||| || ||||| | Sbjct 862431 TGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGG 862490 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || |||||| | |||| | | || | ||||| | || || | Sbjct 862491 GGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCGATCGTGTCCGAGGGCTCGA 862550 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | |||||||| || || || || ||||| ||||| Sbjct 862551 CGTCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 862599 >seq240 Length=9970 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||||||||| | |||| | || |||||||| || || Sbjct 1481 CGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCCTCGAGCTGCTTGCC 1422 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | || || ||||| || ||||| || | ||||| || || |||||| | || Sbjct 1421 CGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 1362 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | | || | ||||| | || || || || || || || | ||||||||| || || Sbjct 1361 CACGTTGTCGATCGTGTCCGAGGGCTCCACGTCGAGCGTGATGGTTTTGCCCGTGAGCGT 1302 Query 27230 TTTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 1301 CTTGACGAAGATCTGCAT 1284 >seq34 Length=376640 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||||||||| | |||| | || |||||||| || || Sbjct 72740 CGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCCTCGAGCTGCTTGCC 72799 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | || || ||||| || ||||| || | ||||| || || |||||| | || Sbjct 72800 CGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 72859 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | | || | ||||| | || || || || || || || | ||||||||| || || Sbjct 72860 CACGTTGTCGATCGTGTCCGAGGGCTCCACGTCGAGCGTGATGGTTTTGCCCGTGAGCGT 72919 Query 27230 TTTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 72920 CTTGACGAAGATCTGCAT 72937 >seq4 Length=3024044 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||| | ||| | || | || | ||| || || || || || ||||||||||| Sbjct 2039885 GCCGCCGCGGAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 2039944 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | | || |||| |||||||| || || ||| | || | ||||| || || || || Sbjct 2039945 GAGGGTCCGGCCGTCCTCGAGCTGCTTCCCCGCGAAGATCAATCGCTGCTGGTCAGGGGG 2040004 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || |||||| | |||| | | || | ||||| | | || || Sbjct 2040005 GATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCGATCGTGTCGCTCGGCTCGAC 2040064 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGC 27245 || || || || | ||||||||||| |||||||| ||||| ||| Sbjct 2040065 GTCGAGCGTGATCGTCTTGCCCGTCAGGGTTTTCACGAAGATCTGC 2040110 >seq26 Length=549629 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||| | ||| | || | || | ||| || || || || || ||||||||||| Sbjct 459801 GCCGCCGCGGAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 459860 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| |||| |||||||| || |||||| | || | ||||| || ||||| || Sbjct 459861 GAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGG 459920 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || |||||| | |||| | | || | ||||| ||| || || Sbjct 459921 GATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCGATCGTGTCGCTGGGCTCGAC 459980 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || || || || || || || ||||| ||||| Sbjct 459981 GTCGAGCGTGATCGTCTTCCCGGTGAGCGTCTTGACGAAGATCTGCAT 460028 >seq5 Length=3000003 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||||||||| | |||| | || |||||||| || || Sbjct 733105 CGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCATCCTCGAGCTGCTTGCC 733164 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | || || ||||| || ||||| || | ||||| || || |||||| | || Sbjct 733165 CGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 733224 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | | || | ||||| ||| || || || || || || | |||||||| || || Sbjct 733225 CACGTTGTCGATCGTGTCGCTGGGCTCGACGTCGAGCGTGATGGTCTTGCCCGTGAGCGT 733284 Query 27230 TTTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 733285 CTTGACGAAGATCTGCAT 733302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424928263017720