Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq59 147 2e-30 seq39 147 2e-30 >seq59 Length=86324 Score = 147 bits (162), Expect = 2e-30 Identities = 162/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 58103 GGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAACGCCGCTCAGTTATC-TCGATTACGT 58161 ||||| || ||||| || || ||||||||||| ||||| ||| | ||| || | ||||| Sbjct 32413 GGCTGCAAGGCGGGCCTCGTCTTCAACCCGGCGACGCCCCTC-GACATCCTCAAGTACGT 32355 Query 58162 CATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGAACCCAGGCTTCGGCGGCCAGTC 58221 ||||||||| | || | ||||| || ||||||||||| || ||||||||||||||||| Sbjct 32354 CATGGACAAGGTCGACATCATCCTCCTCATGTCCGTGAATCCCGGCTTCGGCGGCCAGTC 32295 Query 58222 TTTTATTCCGCAGACGCTGGATAAACTGCGCGAAGTGCGTCGCCGCATTGATGCGTCCGG 58281 || || || |||||| || || |||||| | || | ||| || ||||| || Sbjct 32294 CTTCATCCCCGCGACGCTCGACAAGGCGCGCGAGGCCCGCAAGCTCATCGACGCGTCGGG 32235 Query 58282 TTACGACATTCGCCTGGAAGTGGACGGCGGCGT 58314 |||||||| ||||| || | ||||||||||| Sbjct 32234 CTACGACATCCGCCTCGAGATCGACGGCGGCGT 32202 >seq39 Length=313712 Score = 147 bits (162), Expect = 2e-30 Identities = 162/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 58103 GGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAACGCCGCTCAGTTATC-TCGATTACGT 58161 ||||| || ||||| || || ||||||||||| ||||| ||| | ||| || | ||||| Sbjct 312886 GGCTGCAAGGCGGGCCTCGTCTTCAACCCGGCGACGCCCCTC-GACATCCTCAAGTACGT 312828 Query 58162 CATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGAACCCAGGCTTCGGCGGCCAGTC 58221 ||||||||| | || | ||||| || ||||||||||| || ||||||||||||||||| Sbjct 312827 CATGGACAAGGTCGACATCATCCTCCTCATGTCCGTGAATCCCGGCTTCGGCGGCCAGTC 312768 Query 58222 TTTTATTCCGCAGACGCTGGATAAACTGCGCGAAGTGCGTCGCCGCATTGATGCGTCCGG 58281 || || || |||||| || || |||||| | || | ||| || ||||| || Sbjct 312767 CTTCATCCCCGCGACGCTCGACAAGGCGCGCGAGGCCCGCAAGCTCATCGACGCGTCGGG 312708 Query 58282 TTACGACATTCGCCTGGAAGTGGACGGCGGCGT 58314 |||||||| ||||| || | ||||||||||| Sbjct 312707 CTACGACATCCGCCTCGAGATCGACGGCGGCGT 312675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471234619733800