Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq13 118 3e-21 seq2 96.9 1e-14 >seq13 Length=1338096 Score = 118 bits (130), Expect = 3e-21 Identities = 77/85 (91%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 235966 AATGACACCGTGGCCGAGTGGTTAAGGCGATGGACTGCTAATCCATTTCCCTATGGGATC 236025 || |||||||||||||||||||||||||||||| ||||||| ||||| | || |||| | Sbjct 360673 AACGACACCGTGGCCGAGTGGTTAAGGCGATGGCCTGCTAAGCCATTACTCTCTGGGTGC 360614 Query 236026 GCGAGTTCGAATCTCGTCGGTGTCG 236050 ||||||||||||||||||||||||| Sbjct 360613 GCGAGTTCGAATCTCGTCGGTGTCG 360589 >seq2 Length=3465789 Score = 96.9 bits (106), Expect = 1e-14 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 383693 ATGCACTATCAGGGAATCGAACCCTGGGCGATCGCTTGGAAGGCGAACATGTTACCACTA 383752 || ||||||| ||||||||||||| |||| |||||||||||||||| ||||| |||||| Sbjct 479196 ATACACTATCTGGGAATCGAACCCAGGGCATTCGCTTGGAAGGCGAATATGTTGCCACTA 479255 Query 383753 CACCAATAGTG 383763 ||||||||||| Sbjct 479256 CACCAATAGTG 479266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515231394176555